Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00009 ATGTTTAAGAAAAGACACACCCCTTCTTCTCTGGCAAGGGAATTGTTAGCATTCCAGCCATTGCTTCTTCTGTTCTTGTTCAGCTTGCACCAAAACACTGTGCAATGCCAGGGAAGGTTGAGTAAACACATGTCTTCTGAGCCTCCCTCACCGTCTAGGCCATCACCATCACAATCAGAATACAAGGATGACCCTAGGAAGCTCATTGTTAGCATCGTTTTAGGAGCAGTCACTGGACTATTTGGTTCTTTTCTCTTTGCACTTGTAGTTCGTTTTGTTGTTCAGTATCTGAACCGTACACCAATCCTCAAGGGACCTGTTATATTCTCCCCAAAAATTGTACCCAAGACACTCCAATCAGCTTTGGCAAAAGAAAACTGTTTGCTTGGTTCGAGTCCAAATGGGAAATACTACAAAACGGTGCTTGATAATGGGCTTACAATTGCAGTCAAAAGGCTAACACCCTTTGAAAGCAATTCCCCAGAGATCAGGAGAAAATCAGTGAAGAGGCAAATACAGATAGAGTTAGAGCTTCTTGCCAGCCTAAGACATAGGAACTTGATGAGTTTGAGAGCCTATGTTCGTGAACCTGATGGGATCTCTTTGGTTTATGACTATGTATCCACTGGGAGTCTTGCAGATACATTGAATAGATTGAGGGAAAATGAGTTGCAGCTTGGTTGGGAAGTTAGGCTAAGAATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAATTTGAAGCCTACAAATGTCATGTTGGATGCAGAGTTTGAACCCAGATTGGCAGATTATGGATTGGCCAAACTTCTACCCAACTTGGATAGAGGGACATCTGTCAACAGCCCCCCTGAATGTTTCCATAATTGCAGCAGGTACACAGACAAAAGTGACATCTTCAGTTTTGGCATGATATTAGGTGTTTTATTAACGGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCCAGTGGTGGAAGTTTGGGGTGTTGGCTGAGACACTTGCAGCAAGCAGGTGAGGCACGAGAAGCTCTAGATAAGAGTATTTTGGGGGAAGAAGGAGAAGAAGATGAAGATGAGATGGTAATGGCTCTCAGGATTGCTGCTGCATGCTTATCTGATATGCCTGCTGACAGGCCTTCCAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1224 0.4395 MFKKRHTPSSLARELLAFQPLLLLFLFSLHQNTVQCQGRLSKHMSSEPPSPSRPSPSQSEYKDDPRKLIVSIVLGAVTGLFGSFLFALVVRFVVQYLNRTPILKGPVIFSPKIVPKTLQSALAKENCLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEIRRKSVKRQIQIELELLASLRHRNLMSLRAYVREPDGISLVYDYVSTGSLADTLNRLRENELQLGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGTSVNSPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAREALDKSILGEEGEEDEDEMVMALRIAAACLSDMPADRPSSDELVHMLTQLHSF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00009 407 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 403 - -
Gabi2693g00009 407 ProSiteProfiles Protein kinase domain profile. 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00009 407 SUPERFAMILY Protein kinase-like (PK-like) 127 401 IPR011009 -
Gabi2693g00009 407 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 115 206 - -
Gabi2693g00009 407 Pfam Protein kinase domain 128 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00009 407 MobiDBLite consensus disorder prediction 39 62 - -
Gabi2693g00009 407 Gene3D Transferase(Phosphotransferase) domain 1 207 406 - -
Gabi2693g00009 407 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 207 406 - -
Gabi2693g00009 407 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00009 Gabi-Chr2693 97123 99163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00009 69 404 Receptor kinase-like Gene Family AT2G31880 34.734 7.82e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gabi2693g00009 Pkinase 3.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00009 - - gmx:102664172 678.707