Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00008 ATGTTTAAGAAAAGACACACCCCTTCTTCTCTGGCAAGGGAATTGTTAGCATTCCAGCCATTGCTTCTTCTGTTCTTGTTCAGCTTGCACCAAAACACTGTGCAATGCCAGGGAAGGTTGAGTAAACACATGTCTTCTGAGCCTCCCTCACCGTCTAGGCCATCACCATCACAATCAGAATACAAGGATGACCCTAGGAAGCTCATTGTTAGCATCGTTTTAGGAGCAGTCACTGGACTATTTGGTTCTTTTCTCTTTGCACTTGTAGTTCGTTTTGTTGTTCAGTATCTGAACCGTACACCAATCCTCAAGGGACCTGTTATATTCTCCCCAAAAATTGTACCCAAGACACTCCAATCAGCTTTGGCAAAAGAAAACTGTTTGCTTGGTTCGAGTCCAAATGGGAAATACTACAAAACGGTGCTTGATAATGGGCTTACAATTGCAGTCAAAAGGCTAACACCCTTTGAAAGCAATTCCCCAGAGATCAGGAGAAAATCAGTGAAGAGGCAAATACAGATAGAGTTAGAGCTTCTTGCCAGCCTAAGACATAGGAACTTGATGAGTTTGAGAGCCTATGTTCGTGAACCTGATGGGATCTCTTTGGTTTATGACTATGTATCCACTGGGAGTCTTGCAGATACATTGAATAGATTGAGGGAAAATGAGTTGCAGCTTGGTTGGGAAGTTAGGCTAAGAATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAATTTGAAGCCTACAAATGTCATGTTGGATGCAGAGTTTGAACCCAGATTGGCAGATTATGGATTGGCCAAACTTCTACCCAACTTGGATAGAGGGACATCTGTCAACAGCCCCCCTGAATGTTTCCATAATTGCAGGTACACAGACAAAAGTGACATCTTCAGTTTTGGCATGATATTAGGTGTTTTATTAACGGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCCAGTGGTGGAAGTTTGGGGTGTTGGCTGAGACACTTGCAGCAAGCAGGTGAGGCACGAGAAGCTCTAGATAAGAGTATTTTGGGGGAAGAAGGAGAAGAAGATGAAGATGAGATGGTAATGGCTCTCAGGATTGCTGCTGCATGCTTATCTGATATGCCTGCTGACAGGCCTTCCAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1221 0.439 MFKKRHTPSSLARELLAFQPLLLLFLFSLHQNTVQCQGRLSKHMSSEPPSPSRPSPSQSEYKDDPRKLIVSIVLGAVTGLFGSFLFALVVRFVVQYLNRTPILKGPVIFSPKIVPKTLQSALAKENCLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEIRRKSVKRQIQIELELLASLRHRNLMSLRAYVREPDGISLVYDYVSTGSLADTLNRLRENELQLGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGTSVNSPPECFHNCRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAREALDKSILGEEGEEDEDEMVMALRIAAACLSDMPADRPSSDELVHMLTQLHSF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00008 406 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 402 - -
Gabi2693g00008 406 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 207 405 - -
Gabi2693g00008 406 Gene3D Transferase(Phosphotransferase) domain 1 207 405 - -
Gabi2693g00008 406 Pfam Protein kinase domain 128 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00008 406 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 115 206 - -
Gabi2693g00008 406 ProSiteProfiles Protein kinase domain profile. 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00008 406 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Gabi2693g00008 406 MobiDBLite consensus disorder prediction 39 62 - -
Gabi2693g00008 406 SUPERFAMILY Protein kinase-like (PK-like) 127 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00008 Gabi-Chr2693 97123 99163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00008 69 403 Receptor kinase-like Gene Family AT2G31880 34.551 1.99e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gabi2693g00008 Pkinase 8.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00008 - - gmx:102664172 672.544