Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00007 ATGGGCCAACAAGAAAGGAAAAAAGACCAGCCAGGCATTGAGGTTAAGAACTTTCTGAAGGGAAATAAGGAAAAGAAAAGAAAACAAAACGAAGCAATGTCTTCTCTGCTTTGGAGTTCCATTGCAATATGTGTACAAGTCCTACTCCTTCAGCTATGTTCCCTTGGTGTTGTTGTTTCACACCCTTCACCCTCTCACTCTCACAATGATAGGATTACTCGCTTACCAGGTCAACCCAATGTTGGGTTTCGTCAGTTCTCAGGTTATGTAACCGTTGATGACAAAAACCATAAAGCACTGTTTTTTTACTTTGCTGAAGCTGAGAGTGATGCAGTTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTGGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCCAAAGGAGAGGCCTTGATTAGGAACCAATACAGCTGGAACAGAGAGGCGAATGTGTTATACTTAGAAACGCCAATTGGAGTTGGATTCTCTTACTCAACTGATACTTCATCTTATGATGGTGTGAATGACAAGATTACAGGCAAGGATAATCTGGTGTTCTTGCAAAACTGGTTTGTAAAGTTCCCACAGTACAGAAACAGAAGTTTGTTCATTGTAGGAGAAAGCTATGCTGGTCATTATGTTCCTCAACTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGTAACCCAGTTCTAGAATTTGCAACAGATTTCAATTCAAGAGCTGAGTTCTTCTGGTCTCATGGATTAATTTCAGATGTAACATACAAAATGTTCACTTCTGTTTGTAACTATTCAAGATATGTGAGTGAATACTATAGTGGTGTTGTTTCTCCTATCTGTTCAAGCGTAATGAGCCAAGTTAGTACAGAAACCAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCCGTGTTTTCACAAACCAAACTCCTCAATCCCCAGCAAGTTACTGAAACGATAGATGTATGTGTGGAAGATGAAACAGCCAATTATCTGAACAGGAAAGATGTACAATCAGCTTTACATGCTCGTCTTGTTGGAGTACAAAGATGGTCCGCTTGCAGCAATGTCCTAAATTATGAGCTGCGTGACTTGGAGATACCAACAATCACGGTTGTGGGCGAGCTAGTCAAGGCGGGAATACCAGTATTGGTTTATAGTGGTGATCAGGATTCAGTTATCCCATTGACTGGAAGTAGAACATTAGTACATCAATTGGCAAAAGAACTAGGATTGAAGACCACTGTGCCATACAGGGTCTGGTTTGAGGGGAAGCAGGTTGGTGGGTGGACTCAAGTTTATGGGAACATCCTTTCATTTGCCACCATCAGGGGAGCATCACATGAAGCTCCATTTTCACAGCCTCAAAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGCCGAGCTCTACCTGAAGAATTTTGA 1506 0.4157 MGQQERKKDQPGIEVKNFLKGNKEKKRKQNEAMSSLLWSSIAICVQVLLLQLCSLGVVVSHPSPSHSHNDRITRLPGQPNVGFRQFSGYVTVDDKNHKALFFYFAEAESDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALIRNQYSWNREANVLYLETPIGVGFSYSTDTSSYDGVNDKITGKDNLVFLQNWFVKFPQYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDVTYKMFTSVCNYSRYVSEYYSGVVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKLLNPQQVTETIDVCVEDETANYLNRKDVQSALHARLVGVQRWSACSNVLNYELRDLEIPTITVVGELVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKELGLKTTVPYRVWFEGKQVGGWTQVYGNILSFATIRGASHEAPFSQPQRSLVLFKSFLEGRALPEEF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00007 501 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2693g00007 501 Gene3D - 396 494 - -
Gabi2693g00007 501 Gene3D - 349 384 - -
Gabi2693g00007 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 173 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 162 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 199 224 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Gabi2693g00007 501 SUPERFAMILY alpha/beta-Hydrolases 72 497 IPR029058 -
Gabi2693g00007 501 FunFam Carboxypeptidase 65 498 - -
Gabi2693g00007 501 Pfam Serine carboxypeptidase 77 494 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 FunFam Carboxypeptidase 395 494 - -
Gabi2693g00007 501 Gene3D alpha/beta hydrolase 67 328 IPR029058 -
Gabi2693g00007 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 71 481 IPR001563 GO:0004185|GO:0006508
Gabi2693g00007 501 ProSitePatterns Serine carboxypeptidases, serine active site. 213 220 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00007 Gabi-Chr2693 77428 84771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00007 357 497 Calmodulin-binding Proteins AT2G22960 26.950 6.47e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00007 K16297 - gmx:100805130 832.017