Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2692g00022 ATGGGTAACACAGATTATGATTACCCTTCGGTCATAAACGTTGAGGGCGTGCACCGTGTGGCCATCCCTCCACCTCAACCGTTCTTTAAGTCTCTCAAGAACTCTCTGAAAGAGACCTTCTTCCCAGATGACCCATTGAAAAAGTTCAAGGACCAACCAGCCTCCAAGAGGGTCGTGCTTGGCTTTCAATACTTCTTCCCAATGTTAGAGTGGGCACCACAATACACCCTCCAATTCTTGAAATCAGACCTTATAGCTGGCATCACCATTGCTAGTTTGGCTATTCCTCAAGGCATCAGTTACGCCAAGCTAGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTATACCACCATTGATTTATGCCATGATGGGAAGTTCCAGGGATTTGGCAGTGGGAACTGTGGCTGTTGGATCGCTTCTCATGGCTTCCATGTTGGGTCGTGAGGTTAATCCCAACCAGAACCCAACACTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCTGGAGTTTTGCAGGCATCACTGGGTCTGTTTAGGCTAGGGTTTATCGTGGATTTTCTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTTTGCCTGCAACAGCTAAAATCGATTCTGGGCCTTGAGCATTTTACCCACGAGGCAGATCTCGTGTCAGTAATGCGCTCTGTTTTTACCCAAACTCATGAGTGGAGGTGGGAAAGCGCTGTGTTAGGATGCTGCTTTATTTTCTTCCTTCTCATCACAAGATACTTCAGCAAACGACAACCGAAGTTCTTCTGGGTGTCAGCAATGGCGCCTTTGACGTCCGTTATATTGGGCAGTTTGCTAGTTTATCTCACACACGCCGAGAAGCACGGCGTTCAAGTGATTGGAGAATTGAAGAAGGGGCTAAATCCACCTTCGGTCATGGATTTGGTGTTTGTATCGCCTTATATGAGCACAACTATCAAAACTGGACTTATTATCGGCATTATAGCGCTTGCGGAAGGAATAGCAGTGGGGAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATTTTTGGTTCGTTCACCTCTTGTTACCTCACAACAGGACCATTTTCGCGTTCTGCTGTGAACTACAATGCCGGTTGCAAGACAGCAGCATCAAACATTGTAATGTCAATTGCTGTCATGTTGACATTGTTATTCTTGACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATCATTGTTTCTGCAATGCTCGGGCTCTTAGATTATCAAGCAGTCATCCATTTGTGGAAAATTGACAAATTTGACTTTTTAGTGTGCATCAGTGCATATATTGGCGTAGTCTTTGGGAGTGTTGAGATTGGCTTAGTTATAGCAGTTGCAATATCATTACTTCGAGTACTACTATTTGTTGCAAGGCCGAGAACATTTCTTTTAGGCAACATTCCAAATTCGGTAGCATACAGAAATGTAGAACAATATCCAAATGCAAGTCATATTCCTGGAATCCTGATTCTTGAAATTGATGCACCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATAAAAACTTCAGGGAAAACCAGTTTGCAGTATGTTATAATGGATATGACTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGACTAATGACAGAAGAGGGCTACAACTAGTTTTGGTCAATCCTGGAAGCGAGGTTATGAAGAAGCTGAACAAATCAAAGTTCCTTGATGAATTGGGGCATAAATGGATCTATCTGACAGTTGATGAGGCTGTTGGAGCATGCAACTTCATGCTCCATACATACAAACCGAACCACGTGAAAGATGAATCAGGGGGTTGTAACAGTGTCTGA 1971 0.4384 MGNTDYDYPSVINVEGVHRVAIPPPQPFFKSLKNSLKETFFPDDPLKKFKDQPASKRVVLGFQYFFPMLEWAPQYTLQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPNQNPTLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFTQTHEWRWESAVLGCCFIFFLLITRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGELKKGLNPPSVMDLVFVSPYMSTTIKTGLIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLLDYQAVIHLWKIDKFDFLVCISAYIGVVFGSVEIGLVIAVAISLLRVLLFVARPRTFLLGNIPNSVAYRNVEQYPNASHIPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKTSGKTSLQYVIMDMTAVGNIDTSGISMLEEFKKTNDRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWIYLTVDEAVGACNFMLHTYKPNHVKDESGGCNSV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2692g00022 656 PANTHER SULFATE TRANSPORTER 29 637 IPR001902 GO:0016020|GO:0055085
Gabi2692g00022 656 Pfam STAS domain 512 630 IPR002645 -
Gabi2692g00022 656 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020|GO:0055085
Gabi2692g00022 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Gabi2692g00022 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020
Gabi2692g00022 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Gabi2692g00022 656 Gene3D STAS domain 506 638 IPR036513 -
Gabi2692g00022 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Gabi2692g00022 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Gabi2692g00022 656 FunFam Sulfate transporter 31 491 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2692g00022 Gabi-Chr2692 259182 265407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2692g00022 18 644 Inorganic Solute Cotransporters AT4G02700 68.790 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2692g00022 K17471 - gmx:100791091 1172.15