Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2692g00001 ATGAACCATCTCCTGAGCAATGACAATGTTGTCCTAGATTTGTCTGTTAGGGACAAAACTGACTTGTTGAGAGGAGATGAGCTTATTCAGGATGGGTTTGAGATTTCTCACAATGATCTTGCTAATACCTTTATAAAGCACAGAGTACAGGGCAATGGGCCGGAACTGAATAGGTGGGAATCCGTCTGGACCAGGAGCCTTGAGACCATTCATAGAGAAATAAGCCTCATTTATCCTAATATCCGAGATGGGTTCAAGCAGGATTTTCAAATCAGTGTCATCAAGAGCAGGCCAAGTGGTTGTGGTGACAGTCCAGGAACGGGGTGTTACAAGAAAGTTCTAAGTTGCTGTGAATTTCATCCATACATTGGAATAGGAGTTCTCGTTGATAAATCACTCCTAACCGTTTCGTCTTCTTATGCTAATTTCCCTGCTGTTAAAATGCACGATTTGTTGGAAGAGCTGGGGAAAAAACTAGTTCGAGAAAATTCACCCAAAAAGCCAATCAAGTGGAGCAGGCTTTGGCTCTATAAAGATTTATTCAAGGTTATGTTGAAGGAGAAAATGGGAGGAAATAATGTTGAAGCCATAGTTTTGAATAGCCCAGAAGAAACTCGAAGATTGATGGCTGAAGGATTGTCAAAAATGAATCACCTCAGATTGCTTATACTACGTGGTGTGAAATTTTCAGGCAGCCTCAAATGTCTTTCTAATAAATTACGATATGTGGAGTGGAATGAATATCCTTTCATGTATTTGCCACCAAGTTTTCAGCCGGAGGTTCCTGTTCATTTGATCTTGAAGCATAGTTGCATGACACAATTGTGGGAAGGCAAGAAGTATATGCCCAATTTGATAAGTCTGGATCTTAGCCATTCCAAAAATCTAATCAAAATGCCAGATTTTGGAGAGGTCCCAAATCTTGAGAGGCTGAGTCTTGAAGGATGTATAAAACTTGTGGAGATCGATCCATCCATTGGTCTTCTAAGAAAGCTTGAAGTCTTGAATTTGGAAGACTGCAAAAATCTTTTAAGTATACCCAACAACATAGTGGGTCTCACTTCAATTAAATCATTAAATCTCTCGGGGTGTTCAAAAGTGTTTAACAACCAGCTTGATATAAGTAGTGAAACTGCTATGCACTCCCAATCAGCATCCTCTTGCATCTTCAAAAGGTGTTTGTGCCCTTTCCGTTCCTTGAATTATAAAGATTCAGCTATTTCTTTGTTGCCTTCCTTGCCTAGCTTCTCTTGTTTGGTATATCTTAAATTGAGTTTCTGCAAGCTGGTACAATTCCCTGAAGCTATTGGAAGCTTACATTACTTAAAATACCTTAATCTTGAGGGAAACAAATTTGTTACACTGACTTGTAGCCTGAAGGAGTTTTCAAAACTTGTTGATTTAAGATTGTCACACTGCAAGCGGTTGAAATCTTTGCCTGAGCTCCCTTCATGTACGGACATTCATGAGAATTTCAGAATCATAATATTATATGTTTTCAACTGCCCAAATTTGGAAGAGAGGGAACGCTGCAGTACTATGATTTTTCCATGGATGGCACAAGTGATTGAGGTTCACACTCCTTCCTTCCTTCTTACATTTATTTATCTCTGA 1614 0.3928 MNHLLSNDNVVLDLSVRDKTDLLRGDELIQDGFEISHNDLANTFIKHRVQGNGPELNRWESVWTRSLETIHREISLIYPNIRDGFKQDFQISVIKSRPSGCGDSPGTGCYKKVLSCCEFHPYIGIGVLVDKSLLTVSSSYANFPAVKMHDLLEELGKKLVRENSPKKPIKWSRLWLYKDLFKVMLKEKMGGNNVEAIVLNSPEETRRLMAEGLSKMNHLRLLILRGVKFSGSLKCLSNKLRYVEWNEYPFMYLPPSFQPEVPVHLILKHSCMTQLWEGKKYMPNLISLDLSHSKNLIKMPDFGEVPNLERLSLEGCIKLVEIDPSIGLLRKLEVLNLEDCKNLLSIPNNIVGLTSIKSLNLSGCSKVFNNQLDISSETAMHSQSASSCIFKRCLCPFRSLNYKDSAISLLPSLPSFSCLVYLKLSFCKLVQFPEAIGSLHYLKYLNLEGNKFVTLTCSLKEFSKLVDLRLSHCKRLKSLPELPSCTDIHENFRIIILYVFNCPNLEERERCSTMIFPWMAQVIEVHTPSFLLTFIYL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2692g00001 537 SUPERFAMILY L domain-like 205 504 - -
Gabi2692g00001 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 112 367 IPR044974 GO:0006952
Gabi2692g00001 537 Gene3D Ribonuclease Inhibitor 389 519 IPR032675 -
Gabi2692g00001 537 Gene3D Ribonuclease Inhibitor 192 386 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2692g00001 Gabi-Chr2692 7882 16491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2692g00001 113 475 WRKY Transcription Factor Family AT4G12020 32.990 1.55e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2692g00001 - - gmx:100820213 414.075