Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2691g00001 ATGGGTGGGGCATCACTGCCACTAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTAGGATACTACCTCAAAAGAAAAGTGGATGGGCTTGAAATTGAGCTTGAAGTCATACCCGTGATTGATTTTTACAAATTCGATCCATGGGAGTTGCCGGAGAAATCGTTCCTGCCAAACCGAGATTTGGAATGGTTTTTCTTTTGTCCACGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTATTGGAAAGCCACAGGAAAAGACAGGAAGGTGGTGTGCAAGTCTAATCCATCCAATGTCATAGGGTACCGCAAGACACTTGTTTTTTATCGTGGGAGGGCTCCTTTAGGGGATAGAACTGAATGGATCATGCATGAGTATCGCCTTTGTGATGATCTTGGCCAAGGCTCACCATGTTTTCAGGGTGGTTTTACTTTGTGCCGAGTTATTAAAAAGAATGAGAAGACAAGTGATTCAAAAGAAGGTCACAAGGGCAAAAGGGTTGGAAGCAGTTCCATCAATGGGAGTGACACCTTAATGAGATTCTCTAATGAGCCCTTCAGCATCTCTGGTGATGTTTCCTCTCAAGCAAGTCACTTGAATAATGAGAGCCACAATGTGGCTCCAATGGCAGAGTTTAACCAAGTTTCCATGGAAACTAATTCTTCAAACTTTTGGATCTCCTCTGAGATGATTCTTGATTCTTCAAGGGGATACCTTCAAGAACAAGATAGCGTATCAGAACATTTTCCATTGTATGACTTACCGAGCACAATGACACCATGGCAATCATTGGAACATACAGAAGTTTCACCTAGTTTATCCTACTCAAATTTTAATGGGGAAATTGAATTTGCTGATAATCTCAGTCAAATTGGCTGCATGTCACCTTACTCAGGACAAGGGAATTTCATGGACTTTTGTGGAAGTGGGGATGTTCCTTATGAAGATTATGATCAAATGAATTCAATATTATATCCAAAACCCTTCTAA 1014 0.4142 MGGASLPLGFRFHPTDEELVGYYLKRKVDGLEIELEVIPVIDFYKFDPWELPEKSFLPNRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCKSNPSNVIGYRKTLVFYRGRAPLGDRTEWIMHEYRLCDDLGQGSPCFQGGFTLCRVIKKNEKTSDSKEGHKGKRVGSSSINGSDTLMRFSNEPFSISGDVSSQASHLNNESHNVAPMAEFNQVSMETNSSNFWISSEMILDSSRGYLQEQDSVSEHFPLYDLPSTMTPWQSLEHTEVSPSLSYSNFNGEIEFADNLSQIGCMSPYSGQGNFMDFCGSGDVPYEDYDQMNSILYPKPF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2691g00001 337 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Gabi2691g00001 337 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Gabi2691g00001 337 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Gabi2691g00001 337 FunFam Nac domain-containing protein 86 15 162 - -
Gabi2691g00001 337 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Gabi2691g00001 337 MobiDBLite consensus disorder prediction 162 184 - -
Gabi2691g00001 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2691g00001 Gabi-Chr2691 9864 11430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2691g00001 1 291 NAC Transcription Factor Family AT4G17980 57.095 1.16e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2691g00001 NAM 6.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2691g00001 - - gmx:100792714 558.91