Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00025 ATGGAAGAGGACTCAAAGGAGAAGACCAAGGAGGAGTCACCAAAAGAAACTCGATATAGAGGGGTGCGGCGGCGTCCATGGGGAAAGTTTGCCGCCGAGATTCGGGACCCGGCGCGGCACAGTGCCCGTGTGTGGCTGGGGACATTTCTCACGGCGGAGGAGGCTGCAAGAGCTTATGACCGTGCTGCTTTTGAGATGAGAGGTGCTTTAGCCATTCTCAATTTTCCAAATGAGTATACTTTATGCAATGCAGGTTCTACTATGAACTCCTCTTCATCATTAGCACCTTCAGCTTCTTCAATGCCATCATCTTCTTCTTCTTCAATGCTTAACACTGAGCATGGTAAACAAGTTATTGAGTTCGAGTGTTTGGATGACAAATTGTTAGAGGACCTTCTTGATTGTGATGAGAATACCATCAACAAAGACATGCATAAGTATACTTAG 447 0.4631 MEEDSKEKTKEESPKETRYRGVRRRPWGKFAAEIRDPARHSARVWLGTFLTAEEAARAYDRAAFEMRGALAILNFPNEYTLCNAGSTMNSSSSLAPSASSMPSSSSSSMLNTEHGKQVIEFECLDDKLLEDLLDCDENTINKDMHKYT 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00025 148 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2690g00025 148 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Gabi2690g00025 148 MobiDBLite consensus disorder prediction 90 111 - -
Gabi2690g00025 148 PANTHER DNA-BINDING DOMAIN 7 134 IPR044808 GO:0003700|GO:0009873
Gabi2690g00025 148 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Gabi2690g00025 148 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Gabi2690g00025 148 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00025 Gabi-Chr2690 326399 326845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00025 15 137 AP2-EREBP Transcription Factor Family AT3G23230 62.698 1.25e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi2690g00025 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00025 - - gmx:100781487 172.94