Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00017 ATGAGTACCAACTTGCACCAACTACTTAGAAGCCTTTGTTTGGATACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACATTGTGCTCGGATGACCTTGACATGGGAGGATGCTTACTATGATCATCCTGATAATTATGACTCTTTCAAAAATAAGTGCTGCCAGAAGACCTTGGAGCAGATTGGCAGTGGGGATTTTTCGCATGACCCTCTACGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGTATTGTCGGACAGGTAGCTGTTACCGGAAAGCATAGATGGATCTGTGCAGATACTCAAGTTACAAGTTCTGGCCCATCTTTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAACAGGTTATTGAAGATATAGGGGTTGTAACTCATATCAAAAGTCTTTTTTTGTCTACTCAAGATTACACAATAGGCTATGTTCCTAGTCACGTACAAAATAGTGTCAGGAATTCATCATCTCTGGTAACCTTTGCCTCCACTTCTCTCTGTCTGGATGTATCCATGAAAACTTTGTCGTCAGAAGTTATGCCTACTTGCTTACATGATACAGAGAAAACCATGACGAGTGAAACACTGGATATTTTAATGCCCGTTCAATTTTCTGGGAAGAACTATCCACCTCATGCTGTTTATCAGAAAATGACTGCTGATGTGGCCAAGCATGAGGGGCCGGAATTTAACAGTGACAGAAGTTCCATTTTGCTTCAGCCGATGTCAAACATGATGAGCATGGAACATCAGAAATTTGGAGGGAACAATAGTGGCTGGAAAGATACAAGTTTGGAATCAGAAAAAAGTGTCTCATCATTTCTACACAATTTGACTATGGATAATAATAGCATCAATGCTTTAATAAGTCCGTCAGAAAAAGTTGGAACTACATCTGCATACTTCCCTTCAGACTTTCTTGATGCAGTTGTTTGTGAAAGTGATAAGTTACATCATGTAGATATCAACCATATAGGGGTGTTGAATGTGCCCAGACCTTCAGATGCAAACTCCCAAAAAGATACTCAGAAGTCAAAGCTTCAGACTGAGCCTTGTTACAAGGATACCTCGTACACGTTGAAGTTCCCTGCTGGCTATGAGCTACATGAAGCTCTTGGACCAGGTTTTCTGAAAGGGAGTAAATATTTTGATTGGGCGGCACAGGCAAATCAAGATGTTAAAACTGTTGAGATGTCAGACGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGTCCGGAGCATCTTTTGGAAGCCATGCTGGCTAATGTTTGCCATAGTAATGATAATGTTAACGAGTTATCTTTTTCTACATCAATGCAGTCTGCAATGGCATCAAGAAGAAATCCTGAAGCCTCTGTGCACACTATTAATTCAGAAGGCTATTCAATAGATCAGACCTCTGATGTCAGAGAGGATAAACACCATAGTTTGAGTTCATCAGGGATATGTGGTGTGCTATCCTCCAAAGGTTTTTCTTCTGCATGTCCTAGTTCATGTAGTGAACAGTTTGAGAGATCTTCTGAACCAGCTAAGAACAGCAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGACCAAGGGACAGACAATTGATCCAAGACCGTATCAAGGAGTTGAGAGAACTGGTGCCAAATGGAGCAAAGTGCAGCATTGATTCACTACTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAGAGCATAACTAAGCATGCTGACAAGCTAAATAAATTTTCTGATACAAAGACAAAGTTGCAGCACATGGAAAAAGACAATCTTGGTTCCTCTAGCTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTAAAAGTTCGTTCAATACTAGTGGAGAATCTTAGTAAGAACGGGCAGATGCTTGTTGAGATGTTGTGTGAGGAATGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGTCTGACAATTTTGAATGGTACAACAGAAGATCATGGTGAGAAGACATGTATATGTTTTGTGGTCGAGGGCCAAAACAACAGAAATTTACACAGGTTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGGGCACAAAGTTTTCATAG 2214 0.4146 MSTNLHQLLRSLCLDTDWKYAIFWKLKHCARMTLTWEDAYYDHPDNYDSFKNKCCQKTLEQIGSGDFSHDPLRLAVAKMSYHVYSLGEGIVGQVAVTGKHRWICADTQVTSSGPSFEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNKQVIEDIGVVTHIKSLFLSTQDYTIGYVPSHVQNSVRNSSSLVTFASTSLCLDVSMKTLSSEVMPTCLHDTEKTMTSETLDILMPVQFSGKNYPPHAVYQKMTADVAKHEGPEFNSDRSSILLQPMSNMMSMEHQKFGGNNSGWKDTSLESEKSVSSFLHNLTMDNNSINALISPSEKVGTTSAYFPSDFLDAVVCESDKLHHVDINHIGVLNVPRPSDANSQKDTQKSKLQTEPCYKDTSYTLKFPAGYELHEALGPGFLKGSKYFDWAAQANQDVKTVEMSDEISCSQLTSESRPEHLLEAMLANVCHSNDNVNELSFSTSMQSAMASRRNPEASVHTINSEGYSIDQTSDVREDKHHSLSSSGICGVLSSKGFSSACPSSCSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKFSDTKTKLQHMEKDNLGSSSYQQGSSWAMEVGGHLKVRSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGTTEDHGEKTCICFVVEGQNNRNLHRLDILWPLVQLLQSKGTKFS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00017 737 MobiDBLite consensus disorder prediction 480 499 - -
Gabi2690g00017 737 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Gabi2690g00017 737 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 552 601 IPR011598 GO:0046983
Gabi2690g00017 737 MobiDBLite consensus disorder prediction 537 566 - -
Gabi2690g00017 737 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 735 IPR043561 GO:0003700|GO:0006355
Gabi2690g00017 737 MobiDBLite consensus disorder prediction 480 508 - -
Gabi2690g00017 737 MobiDBLite consensus disorder prediction 542 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00017 Gabi-Chr2690 233302 241044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00017 1 735 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.482 3.18e-153 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00017 - - gmx:100777740 1101.66