Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00013 ATGGATCACTCTCAAATTCTAACTATTGAAGATATTGACATGAGTGACAGTTTAGTATGTGTAGATGATATTGTTGATTTGGAAAAAGATACGGATGAATTTGGAGAAGATGATCTTTGTGAAATCATGGCAAACAACGATGGTGAATGCGGGGAAGTTAATGCACATGAAATTGTGGAAGATGTTGATACTGAATTAAACAAGACCCCAATTTTAACTAGAGTTTTTGAGACATCAGAAGATGCTTATGCTTTTTATAATGCTTATGCAAAAGGCAAGGGGTTCGGAATACGCAAGCAATACCATAACAAGAGTACAATTACAAAACAAATATATAGGTGGAATTATGTGTGCTCGAAGCAAGGTGTCAAGAGACTACATGATAAAAAAGCTGATGTTGACAATGTCAAAAGGCAAAGGGATACAAGGACTAATTGTTTGGCAATGTTGCAAGTAAAGTTGGTGGATGGCATATGGAAAGTGGAGAAATTCAATGATATACACAATCATCCAATGATTAACACTCCAACAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTGAGACGCTCAGATTTGACAAAATCTGTTGTTTCTAAGCTATATCAAGAGGGTTTAACATCTTCGAAAATCTCAAAGGTTGTGAGTGCTATGAACAAAGAGGTTAATCTTACTCCAGTTCAAATCAATAGTATTATATCTAGCCAGCGAAAGAATAATGTGGGGCGAGAATGTCAGGGCATCATCAAACATTTTCAAAAGAAGTCCATGGTTGATGGAGCTTTTTATTTTGATATGGATTTGGCAGAAGATGGAACATTAAGAAGCGTATTCTGGGCAGATGGTAGGTCAAGAACTGCATATGCTCATTTTGGTGAAGTCCTTGTCTTTGATGTGACTTACAAAACAAACAAGTTCAGGTTTCCTTTTGCTCCTTTTGTGGGGGTTAATCACCATGGGCAGACAATTTTATTTGCTGCCGCTTTGTTAGAAGATGAAACAGAGGCAACATTTACGTGGTTGTTTGAACAATTTCGGACATGTATGTTTGGCAAGTCTCCTATTGCTATTATTACTGATCAAGATAAAGCTATGGGAAAAGCAATAGCCAAGATATTTCCAGGATCACGACATCGTTTTTGCGCTTGGCATATAAAGAAACATGTTATGGAGCATAGTCAAGCACTACGCGCACAATTTAAGGATAGTTTTGATGATGACTTCCGTTCATGGTATAAAAGTCGAAACATAGATGAGTTTGAAGACAAATGGGAAGTATTGAGGACTAAATTTGATATTAAAGCAGGTAGTTGGTTGGCTAACATGTATGCTTCACGTCACCATTGGGCAAAAGCATACTTGAAAGATATATTTTTTGCCGGAATGACCACAAGTGGCCGAAGTGAAAGCATCAATGCATTTTTTGATGGATATGTCAACTCTAACACAATGTTAAATGATTTTGTTATCCAGTATGACAAAGCAATCAAATCTAGGAGGGATGCGGAGGAAGATGAGGATTTCAAAACTAGAAATACAAAAGCAGTTTTGGAGACTAATCATCCTATTGAAGCAATAGCTGGAGAACGGTACACAAGAAAATTATTTGAAATTTTCAAAAAGGAGTGGAAGGCTGCCATACTTGATTATTTTCATGAAAAGATTGCAATGAATGAAAACCTTATCATGTACCGAGTGGGGTCTCCTGAAGTTGATAAAGAGTGGTGGGCAATTGTCAAGTACCATTTGACAGAAAGCTTCACAGCTCAATGTTCCTGTGCAAAGTTTGAGACTATGGGGATTTTGTGTAAACATATTCTATACATTATGAAGAAGAAACAAATAATGACCCTTCCCGAGAAATATATCTTGTCTAGATGGACTATGAATGCAAGCTATAAGGCTGAAAATATTGTATCCATTCAAGATGAAACAAATCTTAATGAAATTAGTGCATTGTATTTGTGGTCGATTCATTCGAAGTGCACTATGGCTATTTCTGAAGCAAGAGATTCTATTTTTGAGATTAAAATGTTTGATGCTATGGTTGCTGAATTTTTGCAACGACAGTTGGAAAGAAAAAGAAAAAGAGGTGAAGATGAACTAATTACTGAAATGATTCCACAAGCTTCACTCATTAATGATGTGCGTGATCCCACTCAACCAATCAAAACCAAAGGGCGTCCAAAGGTTGCTTCACGAATAAAATCAAGCATGGAGTTATCGACTAAACAACAAAAAACTTGTAGTTATTGTCGAGGGAAGGGTCATAATAAAACAAGTTGTCAGATGTTAAAGGAAATATTTTGGGGCACTGCTGGTTTCATTTGTATATGGACATATTAA 2346 0.3632 MDHSQILTIEDIDMSDSLVCVDDIVDLEKDTDEFGEDDLCEIMANNDGECGEVNAHEIVEDVDTELNKTPILTRVFETSEDAYAFYNAYAKGKGFGIRKQYHNKSTITKQIYRWNYVCSKQGVKRLHDKKADVDNVKRQRDTRTNCLAMLQVKLVDGIWKVEKFNDIHNHPMINTPTKVKKFLSQNELRRSDLTKSVVSKLYQEGLTSSKISKVVSAMNKEVNLTPVQINSIISSQRKNNVGRECQGIIKHFQKKSMVDGAFYFDMDLAEDGTLRSVFWADGRSRTAYAHFGEVLVFDVTYKTNKFRFPFAPFVGVNHHGQTILFAAALLEDETEATFTWLFEQFRTCMFGKSPIAIITDQDKAMGKAIAKIFPGSRHRFCAWHIKKHVMEHSQALRAQFKDSFDDDFRSWYKSRNIDEFEDKWEVLRTKFDIKAGSWLANMYASRHHWAKAYLKDIFFAGMTTSGRSESINAFFDGYVNSNTMLNDFVIQYDKAIKSRRDAEEDEDFKTRNTKAVLETNHPIEAIAGERYTRKLFEIFKKEWKAAILDYFHEKIAMNENLIMYRVGSPEVDKEWWAIVKYHLTESFTAQCSCAKFETMGILCKHILYIMKKKQIMTLPEKYILSRWTMNASYKAENIVSIQDETNLNEISALYLWSIHSKCTMAISEARDSIFEIKMFDAMVAEFLQRQLERKRKRGEDELITEMIPQASLINDVRDPTQPIKTKGRPKVASRIKSSMELSTKQQKTCSYCRGKGHNKTSCQMLKEIFWGTAGFICIWTY 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00013 781 Pfam SWIM zinc finger 587 607 IPR007527 GO:0008270
Gabi2690g00013 781 Pfam MULE transposase domain 294 387 IPR018289 -
Gabi2690g00013 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 656 IPR031052 GO:0006355
Gabi2690g00013 781 SMART 26again6 589 616 IPR006564 GO:0008270
Gabi2690g00013 781 Pfam FAR1 DNA-binding domain 85 172 IPR004330 -
Gabi2690g00013 781 ProSiteProfiles Zinc finger SWIM-type profile. 581 614 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00013 Gabi-Chr2690 204396 207217 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2690g00013 MULE 6.1e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00013 - - ecad:122594423 731.095