Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00010 ATGAATAGTTCAGGTTCAGGTTCTGGTTCTAGTTCTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTTTGAAAGGTTGTGTTTTTGCACCTTACTTTTGCCACGAGCAGGGTGCTACTCATTTTTCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTAGCTCATCTCCCTGTAACTGATCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTTTCCCATATTTTTGCACTCCAGCAGCAGGTGGTAAATTTACAAGCACAGCTAGCTTATCTCAAAGAACAAGCAGCTCAGAGTTGTTTCAATGCATCTACCAATAAAAACCCTAATGAAAAACACTTTGAAAGATCTAATGCTTTTCCCCAAGATCTTCAAAGTTGGTTCCATGGGGAAAATTCCAACCTGGGGCCAGAATTTCTTCCTAACTTGTCTAATAATTCATCAGCAACACAATATTATGGGAACAATGCTTTCATGGATCTAAACCCTATTGGGGATTATGAATGTTCAGGAGTCAAGGAAGAGAGTAGCTCATTTTCTAGCTTTGAGGAGAGTTCTAATAACTCAATGTCCTATGACTTCCAAACAAACATGAGATCGTGGGCCTTTCATGAAGTGGAGGACCTACATTCAGTGGCTTTTGGATACAGTCGATCAGATTCATGA 732 0.4098 MNSSGSGSGSSSGSGSPCGACKFLRRKCLKGCVFAPYFCHEQGATHFSAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCFNASTNKNPNEKHFERSNAFPQDLQSWFHGENSNLGPEFLPNLSNNSSATQYYGNNAFMDLNPIGDYECSGVKEESSSFSSFEESSNNSMSYDFQTNMRSWAFHEVEDLHSVAFGYSRSDS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00010 243 Coils Coil 97 117 - -
Gabi2690g00010 243 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Gabi2690g00010 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 209 - -
Gabi2690g00010 243 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00010 Gabi-Chr2690 171990 172839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00010 17 151 AS2 family AT3G58190 73.188 4.92e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2690g00010 LOB 1.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00010 K13945 - gmx:100776678 360.147