Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00009 ATGGCTTCTGGCTCTGGCTCTGGATCTCCATGTGGGGCATGCAAGTTCCTCAGACGAAAGTGTTCAGCTGAGTGCATCTTCGCTCCTTACTTTTGCTCCGAACATGGACCAGCTAGATTTGCAGCCATCCATAAAGTGTTTGGTGCTAGCAACGTTTCCAAGTTGCTCTTGCATATACCCGCTCATGATCGTTGTGAGGCTGTGGTTACAATTGCTTATGAAGCCCAAGCTCGTATCAGAGACCCTGTCTACGGTTGTGTCTCCCATATTTTAGCCTTACAGCAACAGGTAGCGAGCTTGCAGGCACAACTGATGCAAGTGAAGGAACAACTGGCTCAGAACCTGATGGAGTCAAGGAAAGTGGAGAATCATTGGTCAGGGAATGTAGCTGGACGATTCAATCCATTTTGTTCCACTAACATGAACCCTATATCTCCTCAGAGCTCGGTTGACTCAATTGATTATAGCAGCATCAATGATGGAATGAGCATGCAAGATATGCAAAGCAGAGAGGATTTCTCATTCCAAGCTTGTTATAAGAAAAGATCATACAACACTGACTTGGGTGAGCTGCAAGAGCTGGCACGTAGGATGATGAGAAACTATAACTAG 612 0.4592 MASGSGSGSPCGACKFLRRKCSAECIFAPYFCSEHGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHILALQQQVASLQAQLMQVKEQLAQNLMESRKVENHWSGNVAGRFNPFCSTNMNPISPQSSVDSIDYSSINDGMSMQDMQSREDFSFQACYKKRSYNTDLGELQELARRMMRNYN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00009 203 Pfam Lateral organ boundaries (LOB) domain 10 108 IPR004883 -
Gabi2690g00009 203 ProSiteProfiles LOB domain profile. 9 111 IPR004883 -
Gabi2690g00009 203 Coils Coil 90 117 - -
Gabi2690g00009 203 PANTHER LOB DOMAIN CONTAINING PROTEIN 6 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00009 Gabi-Chr2690 154673 156236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00009 5 201 AS2 family AT2G42430 50.847 1.07e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2690g00009 LOB 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00009 K13944 - gmx:100801508 311.612