Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00003 ATGAAATATATCTATGGGGATCTCTTGTGTGATAATTTGACATCATGGCAGACTTATACTGGAAATATTCTTATTGCAATCAATCCCTTCCAAAGTCTTCCACACCTGTATGATGCTAATGCGATGAAAATCTACAAGGGAGCAACAATTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGAAATGATTACTGAGGAGAAAAACAACTCTATTCTGGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGTGTTACCTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAACAAGTACTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAGTTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCGATTAGAACTTATCTTCTTGAGAAATCTCGTGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCCTCTCCCCCAGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAAAATCCGAAGAAGAAACTGATTCATCAGTTTTAGAAGATGAAGAATCCAAGTTCCATCTCCAAATAACAGCAGAACTTCTCATGTGTGATCCTAATGCTTTGGAAGATGCACTTTGTAGGCGCGTGATGATTACCCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTGCAACAGTTAGCAGGGATGGTTTAGCCAAGACACTATATTCTCGTTTATTTGACTGGTTAGTCCATAAAATTAATGTCTCCATTGGGCAGGATTCTAGCTCAAAATGTCTAATTGGCGTTCTTGACATATATGGCTTTGAAAGCTTTCGAACTAATAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGCATTGACTGGAGCTACTTAGAATTTGTAGATAACCAAGATGTATTGGATCTCATTGAAAAGAAACCGGGTGGAATAATTTCTCTGCTTGATGAAGCTTGTATGTTTCCAAAGTCAACTCATGAAACTTTTTCACAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTGTTGTTCATTATGCTGGGGAGGTCCAGTATCAGTCTGAGCAGTTTATAGACAAGAACAAGGACTATGTTGTTCCTGAGCATCAATACATGTTAAGTTCTTCCAAATGTTCATTTGTATCAGGCCTTTTCCCTCCACTATCTGAGGAGACGGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAACTACAACAATTGATGGATGCGCTCAATTTGACAGAGCCCCACTATATTAGATGTGTGAAGCCAAATAATCTATTAAAACCTGGCATATTTGAGAATATGAACGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACACACAGGACCTTTCATGAATTTTTAACTCGGCTAGGAATTCTTGCTCCTGAGGTTCTTCGTGGGAGCTTCGATGAAAAGGATTCTTGTAAAAAGATTTTGGAGAAGGTTGGGCTGACAGGTTATCAGATAGGGGAAACACAAGTATTCTTAAGAGCTGGTCAGATGGCTGAACTGGATGCCCAGAGAGCATGCCTGCTTAGCAATTCTGCAACAGTTATCCAAAAGCAGATTAAAACCCATTTTAGTCGGAAAACATATATTGCATTGCGAAAGTCCTCTGTCTTTGTGCAATCCATTTGCAGAGGAGAACTGGCTCGGAGATCATATTATCACATGAAGAGAGAAGCAGCTGCAGTCAGAATTCAAAAGCATATGCTCGGAAAACTAGCCAGAAAATGGTACACCAAAATAAAGTTTTCTGCCATTGTCTTGCAGACAGGTTTCCGGGCAATGGATGCTTGTGATAAATTGAGATACAGAAAGCAAACTTGTGCCTCAACTAGTATTCAGTCCTATTGGCGGCGTCATAAAGCTCTCTTTAATTATCAGAACCTTAAGAAAGCGGCAATGATCTCACAAAGCGTCAATCACTCCAGGGATGAACATGAACAGAAGGTTTTGGAGATATCAGTGGAACATGAAAGTCCTTCAGTGGAAGAACCTTCAAATCCTTTTCAAGAAGAATCCTCAAGTCCTTTACAAGATGATGAAAGCATTGAAGCTATCAAGGATTCCTCTAGTCCTCTCGAAGACATTGAAAAGATTGAGGCTCTTACTGTTGAAATAGAAAACTTGAAGGTCATGTTGCAATCAGAAAAACAAAGAGCTGATGAATTTGAAAGGAAATATGTAGAAGCTGAAGGATCCAGCGAAGAGTTACAGAAAAAGCTTGCAGAAACTGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGACGATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGATGTTGCTTCCAGTAACTCTGATACTTCATCCACAGACTCTGATTTCACGTTTCCAGCTCCTGTTTCGAATCCAGAAACTCTTTCTTCCCCCAAGCCCAAACCTTTTCAACTAGTAGTTCAGGATATCACTGCAGTAGATGGATCAGGATCTGAAAGTGAAAAGGAGGGTTCATTTGATGATTTCTTCTAG 3012 0.3967 MKYIYGDLLCDNLTSWQTYTGNILIAINPFQSLPHLYDANAMKIYKGATIGDLSPHVFAIAEAAYREMITEEKNNSILVSGESGAGKTETTKMLMCYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIKFAKSEEETDSSVLEDEESKFHLQITAELLMCDPNALEDALCRRVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVHKINVSIGQDSSSKCLIGVLDIYGFESFRTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYQSEQFIDKNKDYVVPEHQYMLSSSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMDALNLTEPHYIRCVKPNNLLKPGIFENMNVIQQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRLGILAPEVLRGSFDEKDSCKKILEKVGLTGYQIGETQVFLRAGQMAELDAQRACLLSNSATVIQKQIKTHFSRKTYIALRKSSVFVQSICRGELARRSYYHMKREAAAVRIQKHMLGKLARKWYTKIKFSAIVLQTGFRAMDACDKLRYRKQTCASTSIQSYWRRHKALFNYQNLKKAAMISQSVNHSRDEHEQKVLEISVEHESPSVEEPSNPFQEESSSPLQDDESIEAIKDSSSPLEDIEKIEALTVEIENLKVMLQSEKQRADEFERKYVEAEGSSEELQKKLAETEKRVYQLQDSLNRMISSMSSQVAELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVSNPETLSSPKPKPFQLVVQDITAVDGSGSESEKEGSFDDFF 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00003 1003 FunFam Myosin 2 237 353 - -
Gabi2690g00003 1003 CDD MYSc_Myo11 18 646 IPR036018 -
Gabi2690g00003 1003 Gene3D Kinesin motor domain 17 588 IPR036961 -
Gabi2690g00003 1003 ProSiteProfiles IQ motif profile. 684 713 IPR000048 GO:0005515
Gabi2690g00003 1003 MobiDBLite consensus disorder prediction 807 841 - -
Gabi2690g00003 1003 SMART MYSc_2a 1 659 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 MobiDBLite consensus disorder prediction 943 971 - -
Gabi2690g00003 1003 Gene3D - 365 549 - -
Gabi2690g00003 1003 FunFam Class V myosin 365 510 - -
Gabi2690g00003 1003 SMART iq_5 708 730 IPR000048 GO:0005515
Gabi2690g00003 1003 SMART iq_5 683 705 IPR000048 GO:0005515
Gabi2690g00003 1003 SMART iq_5 756 778 IPR000048 GO:0005515
Gabi2690g00003 1003 SMART iq_5 660 682 IPR000048 GO:0005515
Gabi2690g00003 1003 Gene3D Myosin VI head, motor domain, U50 subdomain 237 527 - -
Gabi2690g00003 1003 Coils Coil 850 905 - -
Gabi2690g00003 1003 MobiDBLite consensus disorder prediction 811 831 - -
Gabi2690g00003 1003 ProSiteProfiles Myosin motor domain profile. 1 658 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 ProSiteProfiles IQ motif profile. 709 733 IPR000048 GO:0005515
Gabi2690g00003 1003 PANTHER MYOSIN 17 930 - -
Gabi2690g00003 1003 Gene3D - 177 235 - -
Gabi2690g00003 1003 MobiDBLite consensus disorder prediction 943 975 - -
Gabi2690g00003 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 712 788 IPR027417 -
Gabi2690g00003 1003 Gene3D - 661 710 - -
Gabi2690g00003 1003 Gene3D - 711 761 - -
Gabi2690g00003 1003 Pfam IQ calmodulin-binding motif 711 729 IPR000048 GO:0005515
Gabi2690g00003 1003 Pfam IQ calmodulin-binding motif 685 704 IPR000048 GO:0005515
Gabi2690g00003 1003 FunFam Myosin heavy chain 177 232 - -
Gabi2690g00003 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 711 IPR027417 -
Gabi2690g00003 1003 Gene3D - 592 659 - -
Gabi2690g00003 1003 Pfam Myosin head (motor domain) 18 646 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 ProSiteProfiles IQ motif profile. 661 688 IPR000048 GO:0005515
Gabi2690g00003 1003 PRINTS Myosin heavy chain signature 121 148 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 PRINTS Myosin heavy chain signature 408 436 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 PRINTS Myosin heavy chain signature 355 383 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 PRINTS Myosin heavy chain signature 74 99 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00003 1003 PRINTS Myosin heavy chain signature 17 36 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00003 Gabi-Chr2690 54408 78090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00003 18 909 Myosins gene family AT1G54560 63.839 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00003 K10357 - gmx:100803485 1692.94