Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2690g00002 ATGGGCATTCCAGAAAACATTGTTGTCGGTTCTCATGTTTGGGTTGGAGATCCAGAATTAGTCTGGATTGATGGACAAGTACTGAATATTAATGGGGAGGAAGCTGAAATTCAAACTAGCAATGGGAAGAAGGTTTTTTCCCGTTTGTCAAAATTATATCCCAAGGATACAGATGCTCCTACTGACGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGCATAATTTGGAAAATAGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCAATCAATCCCTTCCAAAGTCTTCCACACCTGTATGATGCTAATGCGATGAAAATCTACAAGGGAGCAACAATTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGAAATGATTACTGAGGAGAAAAACAACTCTATTCTGGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGTGTTACCTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAACAAGTACTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAGTTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCGATTAGAACTTATCTTCTTGAGAAATCTCGTGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCCTCTCCCCCAGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAAAATCCGAAGAAGAAACTGATTCATCAGTTTTAGAAGATGAAGAATCCAAGTTCCATCTCCAAATAACAGCAGAACTTCTCATGTGTGATCCTAATGCTTTGGAAGATGCACTTTGTAGGCGCGTGATGATTACCCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTGCAACAGTTAGCAGGGATGGTTTAGCCAAGACACTATATTCTCGTTTATTTGACTGGTTAGTCCATAAAATTAATGTCTCCATTGGGCAGGATTCTAGCTCAAAATGTCTAATTGGCGTTCTTGACATATATGGCTTTGAAAGCTTTCGAACTAATAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGCATTGACTGGAGCTACTTAGAATTTGTAGATAACCAAGATGTATTGGATCTCATTGAAAAGAAACCGGGTGGAATAATTTCTCTGCTTGATGAAGCTTGTATGTTTCCAAAGTCAACTCATGAAACTTTTTCACAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTGTTGTTCATTATGCTGGGGAGGTCCAGTATCAGTCTGAGCAGTTTATAGACAAGAACAAGGACTATGTTGTTCCTGAGCATCAATACATGTTAAGTTCTTCCAAATGTTCATTTGTATCAGGCCTTTTCCCTCCACTATCTGAGGAGACGGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAACTACAACAATTGATGGATGCGCTCAATTTGACAGAGCCCCACTATATTAGATGTGTGAAGCCAAATAATCTATTAAAACCTGGCATATTTGAGAATATGAACGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACACACAGGACCTTTCATGAATTTTTAACTCGGCTAGGAATTCTTGCTCCTGAGGTTCTTCGTGGGAGCTTCGATGAAAAGGATTCTTGTAAAAAGATTTTGGAGAAGGTTGGGCTGACAGGTTATCAGATAGGGGAAACACAAGTATTCTTAAGAGCTGGTCAGATGGCTGAACTGGATGCCCAGAGAGCATGCCTGCTTAGCAATTCTGCAACAGTTATCCAAAAGCAGATTAAAACCCATTTTAGTCGGAAAACATATATTGCATTGCGAAAGTCCTCTGTCTTTGTGCAATCCATTTGCAGAGGAGAACTGGCTCGGAGATCATATTATCACATGAAGAGAGAAGCAGCTGCAGTCAGAATTCAAAAGCATATGCTCGGAAAACTAGCCAGAAAATGGTACACCAAAATAAAGTTTTCTGCCATTGTCTTGCAGACAGGTTTCCGGGCAATGGATGCTTGTGATAAATTGAGATACAGAAAGCAAACTTGTGCCTCAACTAGTATTCAGTCCTATTGGCGGCGTCATAAAGCTCTCTTTAATTATCAGAACCTTAAGAAAGCGGCAATGATCTCACAAAGCGTCAATCACTCCAGGGATGAACATGAACAGAAGGTTTTGGAGATATCAGTGGAACATGAAAGTCCTTCAGTGGAAGAACCTTCAAATCCTTTTCAAGAAGAATCCTCAAGTCCTTTACAAGATGATGAAAGCATTGAAGCTATCAAGGATTCCTCTAGTCCTCTCGAAGACATTGAAAAGATTGAGGCTCTTACTGTTGAAATAGAAAACTTGAAGGTCATGTTGCAATCAGAAAAACAAAGAGCTGATGAATTTGAAAGGAAATATGTAGAAGCTGAAGGATCCAGCGAAGAGTTACAGAAAAAGCTTGCAGAAACTGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGTGTGTATCAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGACGATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAG 3051 0.3956 MGIPENIVVGSHVWVGDPELVWIDGQVLNINGEEAEIQTSNGKKVFSRLSKLYPKDTDAPTDGVDDMTKLAYLHEPGVLHNLENRYKINEIYTYTGNILIAINPFQSLPHLYDANAMKIYKGATIGDLSPHVFAIAEAAYREMITEEKNNSILVSGESGAGKTETTKMLMCYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIKFAKSEEETDSSVLEDEESKFHLQITAELLMCDPNALEDALCRRVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVHKINVSIGQDSSSKCLIGVLDIYGFESFRTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYQSEQFIDKNKDYVVPEHQYMLSSSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMDALNLTEPHYIRCVKPNNLLKPGIFENMNVIQQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRLGILAPEVLRGSFDEKDSCKKILEKVGLTGYQIGETQVFLRAGQMAELDAQRACLLSNSATVIQKQIKTHFSRKTYIALRKSSVFVQSICRGELARRSYYHMKREAAAVRIQKHMLGKLARKWYTKIKFSAIVLQTGFRAMDACDKLRYRKQTCASTSIQSYWRRHKALFNYQNLKKAAMISQSVNHSRDEHEQKVLEISVEHESPSVEEPSNPFQEESSSPLQDDESIEAIKDSSSPLEDIEKIEALTVEIENLKVMLQSEKQRADEFERKYVEAEGSSEELQKKLAETEKRVYQLQDSLNSVYQDDIFHVKSSCRAEDDLKYFIKIEFNFSTYC 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2690g00002 1016 FunFam Myosin 2 312 428 - -
Gabi2690g00002 1016 SMART MYSc_2a 56 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 Gene3D - 252 310 - -
Gabi2690g00002 1016 MobiDBLite consensus disorder prediction 886 906 - -
Gabi2690g00002 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 786 IPR027417 -
Gabi2690g00002 1016 CDD MYSc_Myo11 76 721 IPR036018 -
Gabi2690g00002 1016 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 863 IPR027417 -
Gabi2690g00002 1016 FunFam Myosin heavy chain 252 307 - -
Gabi2690g00002 1016 Pfam IQ calmodulin-binding motif 760 779 IPR000048 GO:0005515
Gabi2690g00002 1016 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Gabi2690g00002 1016 MobiDBLite consensus disorder prediction 882 915 - -
Gabi2690g00002 1016 Gene3D - 736 785 - -
Gabi2690g00002 1016 Gene3D - 786 836 - -
Gabi2690g00002 1016 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 ProSiteProfiles IQ motif profile. 736 763 IPR000048 GO:0005515
Gabi2690g00002 1016 Gene3D Kinesin motor domain 65 663 IPR036961 -
Gabi2690g00002 1016 PANTHER MYOSIN 54 984 - -
Gabi2690g00002 1016 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gabi2690g00002 1016 Coils Coil 925 980 - -
Gabi2690g00002 1016 Gene3D Myosin VI head, motor domain, U50 subdomain 312 602 - -
Gabi2690g00002 1016 SMART iq_5 831 853 IPR000048 GO:0005515
Gabi2690g00002 1016 SMART iq_5 735 757 IPR000048 GO:0005515
Gabi2690g00002 1016 SMART iq_5 783 805 IPR000048 GO:0005515
Gabi2690g00002 1016 SMART iq_5 758 780 IPR000048 GO:0005515
Gabi2690g00002 1016 FunFam Class V myosin 440 585 - -
Gabi2690g00002 1016 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Gabi2690g00002 1016 ProSiteProfiles IQ motif profile. 784 808 IPR000048 GO:0005515
Gabi2690g00002 1016 Gene3D - 667 734 - -
Gabi2690g00002 1016 Gene3D - 440 624 - -
Gabi2690g00002 1016 Pfam Myosin N-terminal SH3-like domain 10 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2690g00002 Gabi-Chr2690 50262 76351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2690g00002 1 984 Myosins gene family AT1G54560 63.768 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2690g00002 K10357 - gmx:100803485 1756.11