Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2689g00026 ATGGAAACCGGTGGCGGTGGCGGTGACGGAGGGCAACCTGGAGGTTACGGCGGAAGAGGAATTCAGCAACCGCCTCAGGAGCTGAGTCTGCAACCAGAATGGAGACGCCCAAGGTCAAGTGGCTCAGGCGGAAGAGTGGAGAACGTGATTCTTCAACCGGAATGGAGGCGAGGGCAGTCAACTGGTTCTCCTTCTAAGTCTGGCGGTGAAGCGCAGAAAGAGGAGAACGTGATTCTTCAACCAGAATGGAGGCGAGGGAAGTCAACTGGTTCTCCTTCTGAGTCTGGCGGTGAAGCGCAGAAAGAGGAGAACGTCATTCTTCAACCAGAATGGAGGCGCTCAAGGCCAACTCCAACTCCAAGTGTTTGGGAACCAGAATGGAGGCGATCAAGGCCAACCGCTTCTCCGTCGTGGAACCAAAATTACGGTGGCCGGAAACCAGGAACGTTGATTTCCTGTGGTGTTGAAAGAAGCAGAGACACTAATGACTTTTGGCGACATGCTCCAACTCCAGAAGAATCAACACTATTCATTTTCATTGCAGATTCTGTAGTTCCCAAACTGCAAAGACTTCAAATATCGAAACAATTAGCTATGTCGCCTAGTACCCTCGAAAGAAAGGATAAAATTTCGCCTATTCGGAGACCTGACAATGGTGGCACGCTAGGTATTCTAACGAGCAGACTTCGTGTCAATCATTTCCTTGTTAAGTTGAATCCAGAGAGTATAATAATGCACTATAATGTTGGTGTCAAACCAAAGTTTTCCTCAAATGTTGGCCAGCCTCAGAAATTATCGAAGTCTGAACTTTCCATGATTAGAGAGAAATTGTTTTCTGATGATCCTGAGAGATTGCCCTTGGAGATGACTGCACATGACGGTGCGAAAAATATCTTTAGTGCAGTGCAATTACCAGAAGAAACCTTTACTGTGGATATCTCGGATGGAGAGGATGAAAATACCATTTCATATAGTGTTACCATAACACTTCTTAATAAACTCAGGTTTTCCAAATTAATGGACTATCTTAGTGGGCATACACCCTCAATTCCTAGAGATATTTTACAAGGGATGGACGTGGTGGTTAAAGAGAATCCAGCCAGGCGCACAATTTCTGTGGGACGACATTTCTATCCCACAAATCCTCCTTTGGTAATGAAGGATCTTCACCACGGCATAATTGCCGTTGGGGGGTTTCAGCATAGTTTAAAGCCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCAGTGTTGGCTTTCCGAAAGCGAAGGCCAGTCTTGGATTTCTTGTGTGAGCATATTGATAACTTTAAATTAGATGAATTTGAAAACTTTAGGAAATATGTTGAGGAGGCACTTATTGGATTGCAAGTTAATGTGACTCATCGTAAATCCAAACAGAAATACATTATTGTGGGATTAACACCTACGATTACAAGGTATGTCACTTTCGCCAATGACAATACCGAGGGCTGGAATCTTTCAAAGGATGTTAGTCTTCTTAGCTTTTTTAAAGACAAATATGGCAAGGACATTGTATACAAAGATATTCCTTGTTTAGATTTAGGGAAAGGCAACAAGAAGAACTTTGTACCCATGGAATTCTGTATTTTAGTCGAGGGCCAAAAATATCCCAAAAAGCATTTGGATGGTGTTGCTGCGAAGACATTGAAAGCAATGTCACTAGCTCACCCAAATGAGAGAGAGGGTGCAATACAGAAGATGGTGCAGTCAAGTGATGGACCTTGTGGTGGTGATCTTATTCAAAATTTTGGAATGAGTGTCAACACGACCATGACAACCATTGTAGGACGTGTCATTGGCCCCCCAGAATTGAAGTTAGGTGATCCAAATGGCAAGATTATCAAGATAACACTGGATCTAGAGAAATGTCACTGGAACCTTGTTGGCAGATCAATGGTAGAAAGCAAACCAGTTGAGCGTTGGGCTATTCTTGATTTCACCAGTTCAGGGCCATATAAGTACAAATTAAGAGTAAAGGAATTCATTCAAAAGCTTATTGGTAAATACAAAAAATTGGGTATAGAAATGCAGGAGCCCATTTGGTACGAGGAATCTTCGATGAATATACTTGCGAGTTATGATTTGTTATCCGAATTGCTTGAAAAAATTAAATACAATTGTAAATATAACCAAGGTCACCTGCAATTTCTTCTCTGTGTAATGGCTAAAAAAAGTCCAGGTTACAAGTACCTCAAATGGATTTCCGAGACCAAAGTTGGTATAGTGACACAATGCTGCTTGTCTTATGGTGCTAATCAAGGGGAGGACCTATTTTTTACTAATCTGGCTCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTGGAGCTCAGTAATAGGCTCCCTTACTTTGAGGGTGAAGGACATGTTATGTTTTTAGGGGCTGATGTCAATCATCCCGGTTCACGGGACACCAGGAGTCCATCAATTGCTGCTGTGGTTGCAACTGTTAATTGGCCTGCTGCAAATCGTTATGCAGCACGTGTTTTCCCTCAGTACAATCGAAGTGAGAAAATATTGAACTTTGGGGAGGTTTGCCTTGAGCTTGTTGCATGTTATAGGAGGATGAATGGAGTCAGACCAGAAAGAATTGTTGTTTTTCGTGATGGGGTGGGTGAGTACCAGTTCGACATGGTTCTTAATGAAGAGCTATTAGATTTGAAGGGAGCATTCCAAAGATTAAATTATTTCCCAACAATCACTCTAATTGTAGCACAAAAACGACATCAAACTCGGTTGTTTCCAGAGGGTTGGAGGGATGGGTCTTCAAGTGGTAATATTTTTCCGGGAACAGTTGTGGACACAAAAGTTACACACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTATTATGGAAGCCTAGGTACAAGCAAGCCCACTCACTACCATGTCTTATGGGATGAGCACAAGTTTACATCTGATGAATTGCAGAAGCTCATATATGAGATGTGCTTCACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTCCCTCCCGTGTACTATGCTGACCTTGCTGCTTATAGAGGACGATTATACCACGAAGCAAGCATTGGGATGCAATCTCTGAAGTCAGCAGCATCTCCATTTTCTAAAGCTTCTTCATTGGGTTCACCAACTGCTTCATTTGAACAGGAATTTTACAGGTTGCATGCTGACCTGGAAAACATAATGTTCTTCATCTAA 3213 0.4251 METGGGGGDGGQPGGYGGRGIQQPPQELSLQPEWRRPRSSGSGGRVENVILQPEWRRGQSTGSPSKSGGEAQKEENVILQPEWRRGKSTGSPSESGGEAQKEENVILQPEWRRSRPTPTPSVWEPEWRRSRPTASPSWNQNYGGRKPGTLISCGVERSRDTNDFWRHAPTPEESTLFIFIADSVVPKLQRLQISKQLAMSPSTLERKDKISPIRRPDNGGTLGILTSRLRVNHFLVKLNPESIIMHYNVGVKPKFSSNVGQPQKLSKSELSMIREKLFSDDPERLPLEMTAHDGAKNIFSAVQLPEETFTVDISDGEDENTISYSVTITLLNKLRFSKLMDYLSGHTPSIPRDILQGMDVVVKENPARRTISVGRHFYPTNPPLVMKDLHHGIIAVGGFQHSLKPTSQGLSLCVDYSVLAFRKRRPVLDFLCEHIDNFKLDEFENFRKYVEEALIGLQVNVTHRKSKQKYIIVGLTPTITRYVTFANDNTEGWNLSKDVSLLSFFKDKYGKDIVYKDIPCLDLGKGNKKNFVPMEFCILVEGQKYPKKHLDGVAAKTLKAMSLAHPNEREGAIQKMVQSSDGPCGGDLIQNFGMSVNTTMTTIVGRVIGPPELKLGDPNGKIIKITLDLEKCHWNLVGRSMVESKPVERWAILDFTSSGPYKYKLRVKEFIQKLIGKYKKLGIEMQEPIWYEESSMNILASYDLLSELLEKIKYNCKYNQGHLQFLLCVMAKKSPGYKYLKWISETKVGIVTQCCLSYGANQGEDLFFTNLALKINAKLGGSNVELSNRLPYFEGEGHVMFLGADVNHPGSRDTRSPSIAAVVATVNWPAANRYAARVFPQYNRSEKILNFGEVCLELVACYRRMNGVRPERIVVFRDGVGEYQFDMVLNEELLDLKGAFQRLNYFPTITLIVAQKRHQTRLFPEGWRDGSSSGNIFPGTVVDTKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEASIGMQSLKSAASPFSKASSLGSPTASFEQEFYRLHADLENIMFFI 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2689g00026 1070 ProSiteProfiles PAZ domain profile. 425 541 IPR003100 GO:0005515
Gabi2689g00026 1070 FunFam Protein argonaute 7 419 545 - -
Gabi2689g00026 1070 SMART PAZ_2_a_3 425 563 IPR003100 GO:0005515
Gabi2689g00026 1070 Pfam Piwi domain 726 1020 IPR003165 GO:0003676
Gabi2689g00026 1070 MobiDBLite consensus disorder prediction 54 70 - -
Gabi2689g00026 1070 SMART DUF1785_2 371 424 IPR014811 -
Gabi2689g00026 1070 Pfam N-terminal domain of argonaute 228 362 IPR032474 -
Gabi2689g00026 1070 CDD Piwi_ago-like 589 1022 IPR045246 -
Gabi2689g00026 1070 MobiDBLite consensus disorder prediction 1 149 - -
Gabi2689g00026 1070 Gene3D paz domain 419 545 - -
Gabi2689g00026 1070 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 228 1025 - -
Gabi2689g00026 1070 MobiDBLite consensus disorder prediction 132 146 - -
Gabi2689g00026 1070 Pfam Argonaute linker 1 domain 372 423 IPR014811 -
Gabi2689g00026 1070 SUPERFAMILY PAZ domain 420 579 IPR036085 GO:0005515
Gabi2689g00026 1070 Gene3D - 607 788 - -
Gabi2689g00026 1070 Pfam PAZ domain 442 554 IPR003100 GO:0005515
Gabi2689g00026 1070 CDD PAZ_argonaute_like 425 540 - -
Gabi2689g00026 1070 ProSiteProfiles Piwi domain profile. 725 1024 IPR003165 GO:0003676
Gabi2689g00026 1070 SUPERFAMILY Ribonuclease H-like 718 1024 IPR012337 -
Gabi2689g00026 1070 SMART Piwi_a_2 725 1023 IPR003165 GO:0003676
Gabi2689g00026 1070 Gene3D - 795 1070 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2689g00026 Gabi-Chr2689 248130 253089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2689g00026 229 1024 Eukaryotic Initiation Factors Gene Family AT1G48410 36.223 3.12e-143 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2689g00026 K11593 - gmx:100783571 1623.6