Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2687g00009 ATGGAGAGCACAGACTCATCCACCGGTTCACAACAACCGAACCTGCCACCTGGTTTCCGGTTCCACCCAACCGATGAGGAGCTCGTGGTTCACTACCTTAAGAAAAAAGCTGCATCAGCTCCTCTCCCAGTAGCCATCATCGCCGAGGTTGATCTCTACAAGTTTGATCCATGGGAGTTACCAGCTAAGGCAACGTTTGGGGAACAGGAATGGTACTTCTTTAGTCCTAGGGATAGGAAGTATCCCAATGGTGCTAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAAGCAACTGGTACTGATAAGCCTGTGTTAACCTCTGGTGGAACACAAAAGGTTGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCTCCAAGAGGGATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAATAACACACATAGGTCCCCTATGGAACATGAGAGGGAAGATTCAATGGATGATATGATTGGAGGGATTCCTCCTTCCCTCAACGTTGGCCAAATGAATGCGAGGTTTCATCTTTCAAAGATTTCAACAAGCTACAACAACAACAACAATAACAGTGCATTGTTGGAGAATGACCAGAACTTATTGGAAGGAATGATGATAAGTAGTAACGGTGGGATCAGCACAACTCAGTTGGGAGCCTCAAATCCCAAGACAGAGCTTCCTTTTGTTCCAACCATGACTGCTTCTTCAAACACCAATTCGGCATCCAAAAGAACTCTCTCATCACTGTATTGGAATGATGAGGATGTTGCAGGCACCTCATCATCCAACAAACGGTTCAATTTGGACAGTGGAGATCATGGGAGTGTTGTGAGGACAGAAGAGAATGGCACTGCTAACTCTATTGCCACTCTGCTTAACCAACTCCCTCAAAACACTTCATTGCACCAACAAACAATGCTGGGATCAATAGGTGATGGACTAATTCGGACACCATATCAAATATCAGGAATGAATTGGTATGCTTAA 1098 0.4517 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSLNVGQMNARFHLSKISTSYNNNNNNSALLENDQNLLEGMMISSNGGISTTQLGASNPKTELPFVPTMTASSNTNSASKRTLSSLYWNDEDVAGTSSSNKRFNLDSGDHGSVVRTEENGTANSIATLLNQLPQNTSLHQQTMLGSIGDGLIRTPYQISGMNWYA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2687g00009 365 FunFam NAC transcription factor 56 24 181 - -
Gabi2687g00009 365 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2687g00009 365 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Gabi2687g00009 365 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Gabi2687g00009 365 MobiDBLite consensus disorder prediction 1 17 - -
Gabi2687g00009 365 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Gabi2687g00009 365 PANTHER NAC TRANSCRIPTION FACTOR 56 15 223 - -
Gabi2687g00009 365 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2687g00009 Gabi-Chr2687 270845 272840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2687g00009 1 365 NAC Transcription Factor Family AT3G15510 53.806 1.66e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2687g00009 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2687g00009 - - gmx:100784578 619.002