Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2687g00007 ATGGATCAAGAGATGGCAGACATAGAGTCTCAAACTATTTACAAAGGGTCTCAAACAGTGCATGAGGATGAACCTGACATCTTCCACAAGGGAAAACGTCCCGTAATCCTCAAGTTTGATGAAGTTGTCTATAAAATTAAGAGCAAGAAAGGTGGATTATTTGAGAAGAACACCAAGGCAGAAGAGAAAGTGATACTGAAGGGAGTGACAGGTATTGTTCAACCTGGTGAAATGCTGGCCATGCTAGGTCCATCTGGAAGTGGCAAAACAACTCTGCTAACAGCTTTGGGAGGAAGGCTTGGAGGGAGACTTTATGGAAGTATAACTTACAATGGAGAACCCTTCTCAAATGCAATGAAGAGGAACACTGGCTTTGTTACTCAAGATGATGTTCTTTACCCTCACTTGACTGTGACTGAAACCCTACTGTTCACTGCACTTCTTAGATTGCCCAAAAGTGTCACCAAAGAAGAGAAAGTTATGCATGCAAAAGCTGTGATAGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATTGTTGGAAGCCCATATCTGAGGGGGGTTTCTGGGGGAGAGAGAAAAAGGGTTAGCATTGGACAAGAATTGCTCATAAACCCAAGTTTGTTGTTTCTAGATGAACCTACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACTTTGTGGGAGCTAGCATGTGGTGGGAGAACTATTGTGATGACAATACACCAACCTTCAAGTAGGCTATACTATATGTTTCATAAGGTGTTGCTGCTATCAGAAGGGAACCTGGTGTATTTTGGAAAGGGGTCTGAAGCCATTGAATATTTTTCTAATATTGGATATTCCCCAGCAATGGCCATGAATCCTTCAGACTTCCTTTTAGATCTTGCAAATGGTATATACACTGATGAATTGAATGAGGACCAAACCATAGATAAACAGCAATTAGTTTCCGCGTATAAGAACCGCTTTAAAGCACAATTGAAGCCATTACTTCAAGAAATCGGTGACTCTGGCAAAAGTCAGGGTAGATTTCAAGACACGGGCTCTGAAAAATGGCCTACAAGTTGGTCGCAGCAATTCTTTGTACTGTTAAGAAGAGACGTCAAAGAGAGAAAGTATGAATCATTCTCTGGCGTGCGTATTTGTCAGGTCCTTGTGGTTGCACTTATTTCAGGACTACTATGGTATAAGTCCGATATTTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTCATATCTGGCTTTTGGGGTTTTTTCCCTCTCTTTCAAGCAATTTTCACATTTCCACAAGAGCTAATGATGCTAGAGAAAGAAAGATCCTCAGGAACGTACAGGCTCTCCTCATACTTCATGTCAAGGATAGTAGCTGATCTTCCAATGGAACTTGTCCTTCCCACCATATTTCTTCTCATAACATATTGGATGGCAGGGCTGAAAGCTAATGTGGTCAACTTTTTGTACACACTACTCAGCCTCTTACTCAATGTGTTAGTGGCTCAAGGCTTAGGCCTTGCCATTGGTGCTGTTGTACTGGACCAAAAATCAGCAACCACACTTGCCTCAGTGATCATGCTATGTTTCTTGTTGGCTGGTGGGTTTTATGTTCAGCATGTTCCAAAATTTATAGCATGGGTGAAGTACATCTCCATTAGCTACTATACATACCAGCTCTTTATTGGGTCTCAATATCACACTGGTGAAACATACCCTTGTTCAAATAATGGCCAGTGTCCAATTGTTGAATTTCCTGCTATTAAGGAAATGGGGTTTCATTTCCACGGGCAAGCCTTGGCTGCATTAGCTCTAGTGATAATGCTAATAGGTTACAGACTTATAGCTTATTTTGCACTTATGAGGATTGGAGTGACAAAGAAATTGGCCTAG 1899 0.416 MDQEMADIESQTIYKGSQTVHEDEPDIFHKGKRPVILKFDEVVYKIKSKKGGLFEKNTKAEEKVILKGVTGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGRLYGSITYNGEPFSNAMKRNTGFVTQDDVLYPHLTVTETLLFTALLRLPKSVTKEEKVMHAKAVIDQLGLTKCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTIVMTIHQPSSRLYYMFHKVLLLSEGNLVYFGKGSEAIEYFSNIGYSPAMAMNPSDFLLDLANGIYTDELNEDQTIDKQQLVSAYKNRFKAQLKPLLQEIGDSGKSQGRFQDTGSEKWPTSWSQQFFVLLRRDVKERKYESFSGVRICQVLVVALISGLLWYKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELMMLEKERSSGTYRLSSYFMSRIVADLPMELVLPTIFLLITYWMAGLKANVVNFLYTLLSLLLNVLVAQGLGLAIGAVVLDQKSATTLASVIMLCFLLAGGFYVQHVPKFIAWVKYISISYYTYQLFIGSQYHTGETYPCSNNGQCPIVEFPAIKEMGFHFHGQALAALALVIMLIGYRLIAYFALMRIGVTKKLA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2687g00007 632 FunFam ABC transporter G family member 22 53 282 - -
Gabi2687g00007 632 SMART AAA_5 75 265 IPR003593 GO:0016887
Gabi2687g00007 632 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 288 IPR003439 GO:0005524
Gabi2687g00007 632 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 618 - -
Gabi2687g00007 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 281 IPR027417 -
Gabi2687g00007 632 Gene3D - 55 282 IPR027417 -
Gabi2687g00007 632 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Gabi2687g00007 632 Pfam ABC transporter 66 216 IPR003439 GO:0005524
Gabi2687g00007 632 Pfam ABC-2 type transporter 245 327 IPR043926 GO:0140359
Gabi2687g00007 632 Pfam ABC-2 type transporter 362 568 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2687g00007 Gabi-Chr2687 221665 225071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2687g00007 65 302 Calmodulin-binding Proteins AT2G36910 25.620 1.03e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2687g00007 K05681 - gmx:100816135 983.015