Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2687g00006 ATGGATCACTCTCAAATTGTAACTATTGAAGATATTGACATGAGTGAAAGTTTAGTATGTGTAGATGATATTGTTGATTTGGAAAAAGACGCAGATGAATTTGGAGAAGATGATCTTAGTGAAATCATGGCAAACAAAGATGGTGAATGTGGGGAAAACAATGCACATGCAATTACGGGAGATGTTGATACCGAATTAAGCAAGGCCCCTATTTTAACTAGAGTTTTTGAGACATCCGAAGAAGCTTATGCATTTTATAATGCTTACGCAAAAGGCGAGGGGTTTGGAATACGCAAGCAATACCATAATAAGAGGTTAATTACAAAACAATTATATAGGTGGAATTATGTGTGCTCGAAGCAAAGTGTCAAGAGACAACATGATAAAAGAGCTGATGTTGACAATGTCAAAAGGCAAAAGGATACAAGGACTAATTGTATGGCAATGTTACAAGTAAAGTTGGTGGATGGCCTATGGAAAGTGGAGAAGTTCAATGATATACACAATCATCCATTGATTAACACTCCAACAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTGAGACGCTCGGACTTGACAAAATCTGTTGTTTCTAAGCTTTATCAAGAGGGTTTAACATCTTCGAAAATCTCAAAGGTTGTGAGCGCTATGAACAAAGAGGTTAATCTTACTCCCGTTCAAATTAATAGTATTATATCTAGCCAGAGAAAGAATAATGTGGGGCGAGAATGTCAGGGCATCATCAAACACTTTCAAAAGAAGTCCATGGTTGATGGAGCTTTTTATTTTGATATGGATTTGGCAGAAGATGGAACTTTAAGAAGCGTATTCTGGGCAGATGGTAGGTCAAGAGCTGCATATGCTCATTTTAGTGAAGTCCTTGTCTTTGAGGTGACTTACAGAACAAACAAGTTCAAGTTTCCTTTTGCTCCTTTTGTGGGGGTTAATCACCATGGGCAGGCTATTTTATTTGCTGCCGCTTTGTTAGAAGATGAAACGGAGGCAACATTTATGTGGTTATTTGAACAATTTCAGACGTGTATGTTTGACAAGTCTCCTGTTGTTATTATCACTGATCAAGATAAAGCTATGGGAAAAGCAATTGCCAAGATATTTCCAGGAGCACGACATCGTTTTTGTGCTTGGCATATAAAGAAACATGTTATGGAGCATAGTCAAGCACTACGAGCACAATTTAAGGATAGTTTTGATGTTGACTTCTGTGCGTGGTATAAAAGTCGAAACATTGATGAGTTTGAAGGCAAATGGGAAGTATTGAATTCTAAATATGATATTAAAACAAATAGTTGGTTGGCTAACATGTATGCTTCACGTTATCATTGGGCAAAGCCATACTTGAAAGATACATTTTTTGCCGGAATGACCACAAGTGGCCGAAGTGAGAGCATCAATGCATTTTTTTATGGATATGTTAACTCTAACACAATGTTAAATGATTTTGTTATTCAATATGACAAAGCAATCAAATCTAGGAGGGATGCGGAGGAAGATGAGGATTTCAAAACTAGAAATACAAAAGCAGTTTTGGAGACCAATCATCCTATTGAAGCAATAGCTGGAGAACGGTACACAAGGAAATTGTTTGAAATTTTCAAAAAAGAGTGGAAGGCTGCCATACTTGATTATTTTCATGAAAAGATTGCAACAGAGGAAAACCTTATCTTGTATCGGGTGGGGTCTCCTGAAGTTGATAAAGAATGGTGGGCAATTGTCAAGTTCCATTTGACAGAAAGCTTCACAGCTCAATGTTCGTGTGCAAAGTTTGAGACTATGGGGATTTTGTGTAAACATATTCTATACATTATGAAGAAGAAACAAGTAATGACCCTTCCCGAAAAATATATCTTGTCTAAATGGACCATGAATGCAAGCTATAAGGCTGGAAATCTTGTATCCATTCATGAGGAAACAAATCCTAATGAAATTAGTGCATTGTCTTTGTGGTCGATTCATTCAAACTGCACTATGGCTATTTCTGAGGCAAGAGATTCTATTTTTGAGATTAAAAAGTTCGATGCTATAGTTGCTGAATTTTTGCAACAACAGTTGGAAAGAAAAAGAAAAAGAGGTGAAGATGAACTAATTACCTAA 2115 0.366 MDHSQIVTIEDIDMSESLVCVDDIVDLEKDADEFGEDDLSEIMANKDGECGENNAHAITGDVDTELSKAPILTRVFETSEEAYAFYNAYAKGEGFGIRKQYHNKRLITKQLYRWNYVCSKQSVKRQHDKRADVDNVKRQKDTRTNCMAMLQVKLVDGLWKVEKFNDIHNHPLINTPTKVKKFLSQNELRRSDLTKSVVSKLYQEGLTSSKISKVVSAMNKEVNLTPVQINSIISSQRKNNVGRECQGIIKHFQKKSMVDGAFYFDMDLAEDGTLRSVFWADGRSRAAYAHFSEVLVFEVTYRTNKFKFPFAPFVGVNHHGQAILFAAALLEDETEATFMWLFEQFQTCMFDKSPVVIITDQDKAMGKAIAKIFPGARHRFCAWHIKKHVMEHSQALRAQFKDSFDVDFCAWYKSRNIDEFEGKWEVLNSKYDIKTNSWLANMYASRYHWAKPYLKDTFFAGMTTSGRSESINAFFYGYVNSNTMLNDFVIQYDKAIKSRRDAEEDEDFKTRNTKAVLETNHPIEAIAGERYTRKLFEIFKKEWKAAILDYFHEKIATEENLILYRVGSPEVDKEWWAIVKFHLTESFTAQCSCAKFETMGILCKHILYIMKKKQVMTLPEKYILSKWTMNASYKAGNLVSIHEETNPNEISALSLWSIHSNCTMAISEARDSIFEIKKFDAIVAEFLQQQLERKRKRGEDELIT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2687g00006 704 Pfam MULE transposase domain 294 387 IPR018289 -
Gabi2687g00006 704 Pfam FAR1 DNA-binding domain 85 173 IPR004330 -
Gabi2687g00006 704 ProSiteProfiles Zinc finger SWIM-type profile. 581 614 IPR007527 GO:0008270
Gabi2687g00006 704 SMART 26again6 589 616 IPR006564 GO:0008270
Gabi2687g00006 704 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 656 IPR031052 GO:0006355
Gabi2687g00006 704 Pfam SWIM zinc finger 587 607 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2687g00006 Gabi-Chr2687 208491 210605 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2687g00006 MULE 7.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2687g00006 - - lsv:128127215 666.381