Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2686g00001 ATGAATCACAGTCGGTCACAAGAAGCTCTGAAGACAGATCATAGTTATGCAAATTCGGCAAATAATGTTTCAGAAAGTCACATAGAACAGGTTACTCAAAATGTTGCAAAGATGACAACTAAACCAGCATCAAAACCTCAGAAATTAGAACCACCAATGAGGAACATTTCTGATTTTTCAACTACTCAACGCCCAAGTCCAGGTGCAAGAATGCCTTCAAATTCTGATTCTTCAACTACTCAACGTCCAAGTCCAGGTGCAAGAATGCCTTCAAATTCTGATCCTTCAACTACCTCAACATCAGGAACTGCTTCAAGGGGATTTCCTATACCTACTACAAAGAGCACCAATCAAGGACAAGGGAGTGGCACAAGTTCCCGCAGTGACAGTTTAGAGAGTACTAGTGCACCCATTAAGCCACATACTGGAGGTCATTCAAGGTGGGATGCAATTAACATGGTTTCAAAGGGTACTAGTCTTAATCTTAGTCATTTCAGGCTTCTGAAGCGTGTTGGTTATGGAGATATTGGAAGTGTGTATCTTGTGGAACTTAAAGGGACTAAGGCCTTCTTTGCAATGAAAGTAATGGATAAGGCATCCCTTGCAAGTAGAAACAAGCTTCTCAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGACCACCCTTTTTTGCCAACTTTATACTCTTACTTTGAAACTGATAAGTATTACTGTTTGGTCATGGAGTTCTGTAGTAGTGGTAGTCTGCATTCCCTCCGGTTGAAGCAACCTAACAAGCATTTCACTGAAGAAGCTGCAAGGTTTTATTGTGCAGAGATTTTGTTAGCTCTTGAGTATCTCCACATGCTAGGCATAGTGTACAGAGACTTAAAGCCAGAGAATGTTTTAGTCAGAGATGAAGGCCACATCATGCTATCAGATTTTGATTTATCGCTTCGCTGTTCTGTGAGTCCAACACTTGTGAAATCTTCATCAGCACATGTAAGTAGCAATGGTTCTGTGGGAATATTGGATGATGAACATGCAGTCCCTGGTTGCATGCAGCCATCAAGTTTCTTCCCTCGCATTTTGCCTTCAAAAAAGAACCGAAAATCAAAATCAGATTTTGGCCTTATGGTTGGAGGTCGTCTACCTGAACTAATGGCAGAGCCTACAAATGTGCGTTCAATGTCATTTGTAGGGACACATGAATATCTTGCACCAGAGATTATACGTGGTGAGGGACATGGTAGTGCAGTGGATTGGTGGACATTTGGAATATTCTTATATGAGCTTTTGCATGGGACAACACCCTTTAAGGGTGCAGGAAATCGTGCTACATTGTTTAATGTCGTAGGACAACCATTAAGGTTCCCTGAAACTCCACATGTTAGTCCTGTGGCTAGAGATCTTATTAAAGGGTTGTTGGTGAAAGAACCTCATAAAAGATTTGCTCATAGGAGAGGTGCTACTGAAATAAAACAACACCCCTTTTTTGAAGGAGTGAATTGGGCTCTAATTAGAAGTTCTACACCTCCTATTATACCTGAACCTCTGGATTTTTCCCAGTATGCTAGCAGAGAAACTGAGGCACCAGCAGATAAGAAGATGCCAGAGATTGCAAGTGATAAAAACAACAATGCACAACCTGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1665 0.4102 MNHSRSQEALKTDHSYANSANNVSESHIEQVTQNVAKMTTKPASKPQKLEPPMRNISDFSTTQRPSPGARMPSNSDSSTTQRPSPGARMPSNSDPSTTSTSGTASRGFPIPTTKSTNQGQGSGTSSRSDSLESTSAPIKPHTGGHSRWDAINMVSKGTSLNLSHFRLLKRVGYGDIGSVYLVELKGTKAFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKYYCLVMEFCSSGSLHSLRLKQPNKHFTEEAARFYCAEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHVSSNGSVGILDDEHAVPGCMQPSSFFPRILPSKKNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPETPHVSPVARDLIKGLLVKEPHKRFAHRRGATEIKQHPFFEGVNWALIRSSTPPIIPEPLDFSQYASRETEAPADKKMPEIASDKNNNAQPDSSYEDFEYF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2686g00001 554 PANTHER FLIPPASE KINASE 1-RELATED 24 519 - -
Gabi2686g00001 554 ProSiteProfiles Protein kinase domain profile. 165 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2686g00001 554 FunFam Serine/threonine-protein kinase D6PK-like 163 248 - -
Gabi2686g00001 554 Gene3D Transferase(Phosphotransferase) domain 1 249 318 - -
Gabi2686g00001 554 Gene3D Transferase(Phosphotransferase) domain 1 369 511 - -
Gabi2686g00001 554 MobiDBLite consensus disorder prediction 54 140 - -
Gabi2686g00001 554 SMART serkin_6 165 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2686g00001 554 FunFam serine/threonine-protein kinase D6PK-like 249 316 - -
Gabi2686g00001 554 MobiDBLite consensus disorder prediction 11 41 - -
Gabi2686g00001 554 Pfam Protein kinase domain 386 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2686g00001 554 Pfam Protein kinase domain 166 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2686g00001 554 MobiDBLite consensus disorder prediction 1 147 - -
Gabi2686g00001 554 CDD STKc_phototropin_like 163 514 - -
Gabi2686g00001 554 Gene3D Phosphorylase Kinase; domain 1 163 248 - -
Gabi2686g00001 554 FunFam Serine/threonine-protein kinase AGC1-7 386 511 - -
Gabi2686g00001 554 SUPERFAMILY Protein kinase-like (PK-like) 162 525 IPR011009 -
Gabi2686g00001 554 MobiDBLite consensus disorder prediction 512 554 - -
Gabi2686g00001 554 ProSiteProfiles AGC-kinase C-terminal domain profile. 494 554 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gabi2686g00001 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2686g00001 Gabi-Chr2686 23935 27048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2686g00001 28 554 AGC Kinase Gene Family AT1G79250 64.376 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi2686g00001 Pkinase 7.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2686g00001 - - gmx:100802478 805.438