Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2684g00004 ATGATGACACCAAATTTGAACCTGGAACCTGAAAATAATTTAGAAGCTAGCAGCCAAGTAGGTTTCAATATATCCTTACAAGAAACATCCCATGATCATACCAAGGACAGCACCACCATTTCTTCCTGTCATAAAAATCTTACAAAGACTGATCCTGATCCAGGTTCTATTTCCCTTGACTTGACCCTCAACTTCAATTCAAGTGATGAAGAATTGAAGGGTACAAGTGATACTAACAGTGAAGTGGGAGCTGAAACTAATGCTTCAGCATCAGCAATTCCTAGACTTTTCTCTTGTAACTATTGTAGGCGGAAGTTCTTCAGCTCACAGGCATTGGGTGGCCATCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGCACAATGCGAATGGGGATGTTCAATGAAAGGTATAGAAGCTTAGCATCTTTACCACTTCATGGTTCTTCTTTTCGGTCGCTTGGTATTGAAGCTCATTCTGCAATGCACCAAAGACATATGCCATTGGTGAAGGCTCCTGATATGAGAGCTGCTGCAAAATTTGAGAAAGACTGTTTCGGAACACCAATGTTTATGGAAGATGATGATGTAGGTCTATTTTGGCCTGGCAGTTTCCGGAGGATAGATGAAAGAGGTGGTGTTAATTTTGGGCATGAACATGCTCATAATTCAAATACTAGTTTTGTAGCATCTGCACCTCCAGCACAAACATCTACATCCCCTGATCTCACTCTGAGGCTTTAA 747 0.415 MMTPNLNLEPENNLEASSQVGFNISLQETSHDHTKDSTTISSCHKNLTKTDPDPGSISLDLTLNFNSSDEELKGTSDTNSEVGAETNASASAIPRLFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRTMRMGMFNERYRSLASLPLHGSSFRSLGIEAHSAMHQRHMPLVKAPDMRAAAKFEKDCFGTPMFMEDDDVGLFWPGSFRRIDERGGVNFGHEHAHNSNTSFVASAPPAQTSTSPDLTLRL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2684g00004 248 MobiDBLite consensus disorder prediction 225 248 - -
Gabi2684g00004 248 MobiDBLite consensus disorder prediction 29 55 - -
Gabi2684g00004 248 FunFam Zinc finger protein 2 73 143 - -
Gabi2684g00004 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Gabi2684g00004 248 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Gabi2684g00004 248 MobiDBLite consensus disorder prediction 40 55 - -
Gabi2684g00004 248 Gene3D Classic Zinc Finger 76 144 - -
Gabi2684g00004 248 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 174 IPR044246 GO:0009788
Gabi2684g00004 248 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2684g00004 Gabi-Chr2684 25198 30544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2684g00004 95 248 C2H2 Transcription Factor Family AT1G66140 45.251 1.95e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2684g00004 - - gmx:100777133 380.178