Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2679g00020 ATGCAGAGCGTGGTTTTCACTCTCTCCCCTTCTTTTTCTCTTTCTCTCAACAAACCTCGCACGCGCTTCCACTCTATTACTCTCTCTTCTTCCACTTCCAAACCCAACGTCAATGTCTCTTCTTCTTCCTTCCCGCGCCAACCGTTCTCTCTTGCCTCTTCTTCCTCTTCCAAACTCACGCTCTTTCAGGCCAAAGCAACCTCCGTGCCGGAGAGCAGAGATGATTCCTCCGGCAGTAACAGTTTGTTCAATACTCTGGAACTTGGAGCCTTGTTTGGCTTCTGGTTAATCTTCAACATCTACTTCAACATCTATAACAAACAGGTTTTGAAGGTGTACCATTTCCCACTAACTGTCACTGCAATTCAGTTTGCAGTGGGAACTGTCCTTATATTGTTTATGTGGGGATTTAATCTCTATAAGAGACCAAAAGTCACTGGTGCTCAGCTTGCAGCAATATTGCCACTGGCTTTGGTACATACTCTGGGGAACCTTTTCACTAATATGAGTCTTGGAATGGTCTCTGTGTCTTTCACTCATACAATAAAAGCAATGGAGCCTTTCTTTTCAGTGATCCTCTCTGCTATGTTCCTTGGAGAGATGCCTACTGCATGGGTGGTTGCTACCCTTTTGCCTATTGTTGGTGGGGTGGCGCTGGCGTCTGTTACGGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGGCAAACCAATATCGTAATGTTCTTAGCAAGAAGGTCATGGTTAAGGAGGAGGAATCTATGGACAACATAACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTGTCAGCACCTGTAACTATTTTCATGGAGGGTGCCAAATTTACCCCTGCTTACCTGCAATCCGCTGGATTAGATGTTAGACAAGTTTACATAAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAGGGTATCACCTGTAACTCACTCTGTGGGAAATAGTGTCAAGCGGGTCGTGGTCGTTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCACCAATCAACGCATTAGGGACTGCTATAGCTCTTGCTGGGGTTTTCCTCTATTCAAGGGTGAGGCGAATGAAGCCAAAGACAGCTTAA 1161 0.4496 MQSVVFTLSPSFSLSLNKPRTRFHSITLSSSTSKPNVNVSSSSFPRQPFSLASSSSSKLTLFQAKATSVPESRDDSSGSNSLFNTLELGALFGFWLIFNIYFNIYNKQVLKVYHFPLTVTAIQFAVGTVLILFMWGFNLYKRPKVTGAQLAAILPLALVHTLGNLFTNMSLGMVSVSFTHTIKAMEPFFSVILSAMFLGEMPTAWVVATLLPIVGGVALASVTEASFNWAGFWSAMASNLANQYRNVLSKKVMVKEEESMDNITLFSIITVMSFLLSAPVTIFMEGAKFTPAYLQSAGLDVRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNSVKRVVVVVSSVIFFQTPVSPINALGTAIALAGVFLYSRVRRMKPKTA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2679g00020 386 PANTHER SOLUTE CARRIER FAMILY 35 87 379 - -
Gabi2679g00020 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 380 - -
Gabi2679g00020 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 131 222 - -
Gabi2679g00020 386 Pfam Triose-phosphate Transporter family 87 376 IPR004853 -
Gabi2679g00020 386 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 86 384 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2679g00020 Gabi-Chr2679 202214 204906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2679g00020 3 384 Antiporters AT5G33320 67.742 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2679g00020 K15283 - gmx:100780925 555.058