Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2677g00021 ATGGCAGATGATGAAGCACAAAATGATCTGAAGGAGGAGGTCACCGAAATTGCGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAACCACAATTGTGGATCCAGCTGATGATTCAGTGGAGAAGTTGGCTGAGAAGACAGAAAATCTGTCTGTCTCTGATGTGGCTGAGAGTTCATTTTCCGGTTTAAAAAAGAAGAAGAAGAAACCTGTTGAAATCAGTAACTTAAATGATGAGGGTGGAGATGCAATTGAAGATTTGGATGATCACGATGAAGAAGATGAAGCAGATGACGTTTCCTTGCAGCCCCGTTATCCTTGGGAAGGGAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGAGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACCGTCGGAGGACTGTTATGAGGCCTCCACAAGTTCTACGGGAGGGCACTAAGAAAACTGTCTTCGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACTAGTGGCTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCCAAGAACTTTGAAGGAATTCTACGACGATATGTCAATGAGTATGTCATTTGCCTTGGATGCAAAAGTCCTGACACAATCCTTTCTAAGGAGAACCGTTTGTTCTTTCTCCGATGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAACGCGGGGACATGA 810 0.4395 MADDEAQNDLKEEVTEIAPFDPTKKKKKKKTTIVDPADDSVEKLAEKTENLSVSDVAESSFSGLKKKKKKPVEISNLNDEGGDAIEDLDDHDEEDEADDVSLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2677g00021 269 MobiDBLite consensus disorder prediction 61 76 - -
Gabi2677g00021 269 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Gabi2677g00021 269 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Gabi2677g00021 269 MobiDBLite consensus disorder prediction 7 23 - -
Gabi2677g00021 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 118 268 IPR045196 GO:0003743|GO:0006413
Gabi2677g00021 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Gabi2677g00021 269 Gene3D - 112 254 - -
Gabi2677g00021 269 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2677g00021 269 MobiDBLite consensus disorder prediction 47 108 - -
Gabi2677g00021 269 MobiDBLite consensus disorder prediction 80 99 - -
Gabi2677g00021 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Gabi2677g00021 269 FunFam Eukaryotic translation initiation factor 2 subunit 112 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2677g00021 Gabi-Chr2677 355422 360038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2677g00021 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 76.119 5.53e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2677g00021 K03238 - gmx:100783618 459.914