Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2677g00003 ATGGTTGGTAACGACAATAACAACAGCAACAAGGAGAAGGAGAAAGACCTTGAGCTTTTGTTTGAGGAGAACGATGAAGATGTCAATGATGATGAACAACAGGATATTGAAGCTGTGAAGTTTGAGAGTGAGAGTAGCAGTGAAGGTGGCAGTGATGATGACGGAAATGATAGAACACAGCTTCAGTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTATACAATTGCTGCAGCTCCAAATTTTGAATCAATTCTTCGAGGACCAAGTTTTCTTTATTCCAGTGTTGGCAATCTTTCAAAGAGTAGCTTAGACATAGATGGAAAGACTCCTTTTCTATCTGGTCAGGAAGGCATTATTAATCAATCAACATGGTGGGAGAAAGCCTCAGTGCAAAGGCATTATACTGGAGAATTGCCCATTGGTTATGGATGCAGCTTCACTCAAACAGTTTTCAACGGGATTAATGTGATGGCTGGAGTTGGCCTTTTGTCTACACCTTATACAGTGAAAGAAGCTGGGTGGATGAGCATGGCGGTGTTGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCAACCTTATGAGACTCTGCTTTGAAACTAGAGAAGGAATCACAAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGTATAGTAGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGCGATAACCTCACTAGTTTGTTTCCTGGAACATCTTTAGATTTGGGTGGTTTACAGTTAGACTCCATGCACTTGTTTGGAGTTTTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATATCTTTTCTATCAGCTGGAGGGGTTGTTGCAACCCTTTTGATTATTATTTGTTTGTTTAGTGTTGGTGCAACAGACAGTGTTGGATTCCATCACACTGGTCCATTGGTAAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTATGCAGGACATTCAGTTTTTCCAAATATATATCAGTCTATGGCTGACAAAAAACAATTCACCAAAGCACTAATAACATGTTTTGTTTTGTGTATTTTGATATATGGAGGCGTTGCAATCATGGGATTTCTCATGTTTGGCGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCTGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCTTTGACTAAATATGCTTTGTTGATGAACCCACTAGCAAGAAGTCTAGAGGAGTTGCTACCAGAAAGAATTTCGAGTACTTATTGGTGCTTCCTTCTTCTTAGAACAGTACTTGTTGCATCTACAGTTTGTGTTGCTTTTCTTATCCCCTTTTTTGGGCTTGTGATGGCTTTGATTGGTTCTCTCTTCAGTATACTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCTACAAATACCCAGGTTGCACTGAGCGTCACAATTACTGCACTGGGAATCATTTGTGGGCTCCTTGGATCATATTCCTCTCTGTTGAATATTGCGGATAGTTACAAAGACTAA 1626 0.3942 MVGNDNNNSNKEKEKDLELLFEENDEDVNDDEQQDIEAVKFESESSSEGGSDDDGNDRTQLQSFTSQQWPQSYKETTDSYTIAAAPNFESILRGPSFLYSSVGNLSKSSLDIDGKTPFLSGQEGIINQSTWWEKASVQRHYTGELPIGYGCSFTQTVFNGINVMAGVGLLSTPYTVKEAGWMSMAVLLLFAVICCYTANLMRLCFETREGITSYPDIGEAAFGKYGRIVVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLQLDSMHLFGVLTALIILPTVWLKDLRIISFLSAGGVVATLLIIICLFSVGATDSVGFHHTGPLVNWSGIPFAIGIYGFCYAGHSVFPNIYQSMADKKQFTKALITCFVLCILIYGGVAIMGFLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPERISSTYWCFLLLRTVLVASTVCVAFLIPFFGLVMALIGSLFSILVSVIMPSLCFLKIVGKKATNTQVALSVTITALGIICGLLGSYSSLLNIADSYKD 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2677g00003 541 Pfam Transmembrane amino acid transporter protein 152 529 IPR013057 -
Gabi2677g00003 541 MobiDBLite consensus disorder prediction 19 33 - -
Gabi2677g00003 541 Gene3D Amino acid/polyamine transporter I 150 538 - -
Gabi2677g00003 541 MobiDBLite consensus disorder prediction 56 72 - -
Gabi2677g00003 541 PANTHER OS05G0424000 PROTEIN-RELATED 154 517 - -
Gabi2677g00003 541 FunFam Amino acid transporter AVT1A 149 538 - -
Gabi2677g00003 541 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2677g00003 Gabi-Chr2677 26248 33945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2677g00003 26 474 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.522 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2677g00003 K15015 - gmx:100790344 873.618