Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2677g00002 ATGGTTGGTAACGACAATAACAACAGCAACAAGGAGAAGGAGAAAGACCTTGAGCTTTTGTTTGAGGAGAACGATGAAGATGTCAATGATGATGAACAACAGGATATTGAAGCTGTGAAGTTTGAGAGTGAGAGTAGCAGTGAAGGTGGCAGTGATGATGACGGAAATGATAGAACACAGCTTCAGTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTATACAATTGCTGCAGCTCCAAATTTTGAATCAATTCTTCGAGGACCAAGTTTTCTTTATTCCAGTGTTGGCAATCTTTCAAAGAGTAGCTTAGACATAGATGGAAAGACTCCTTTTCTATCTGGTCAGGAAGGCATTATTAATCAATCAACATGGTGGGAGAAAGCCTCAGTGCAAAGGCATTATACTGGAGAATTGCCCATTGGTTATGGATGCAGCTTCACTCAAACAGTTTTCAACGGGATTAATGTGATGGCTGGAGTTGGCCTTTTGTCTACACCTTATACAGTGAAAGAAGCTGGGTGGATGAGCATGGCGGTGTTGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCAACCTTATGAGACTCTGCTTTGAAACTAGAGAAGGAATCACAAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGTATAGTAGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGCGATAACCTCACTAGTTTGTTTCCTGGAACATCTTTAGATTTGGGTGGTTTACAGTTAGACTCCATGCACTTGTTTGGAGTTTTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATATCTTTTCTATCAGCTGGAGGGGTTGTTGCAACCCTTTTGATTATTATTTGTTTGTTTAGTGTTGGTGCAACAGACAGTGTTGGATTCCATCACACTGGTCCATTGGTAAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTATGCAGGACATTCAGTTTTTCCAAATATATATCAGTCTATGGCTGACAAAAAACAATTCACCAAAGCACTAATAACATGTTTTGTTTTGTGTATTTTGATATATGGAGGCGTTGCAATCATGGGATTTCTCATGTTTGGCGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCTGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTGATAAACAAATATGCTTTGTTGATGAACCCACTAGCAAGAAGTCTAGAGGAGTTGCTACCAGAAAGAATTTCGAGTACTTATTGGTGCTTCCTTCTTCTTAGAACAGTACTTGTTGCATCTACAGTTTGTGTTGCTTTTCTTATCCCCTTTTTTGGGCTTGTGATGGCTTTGATTGGTTCTCTCTTCAGTATACTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCTACAAATACCCAGGTTGCACTGAGCGTCACAATTACTGCACTGGGAATCATTTGTGGGCTCCTTGGATCATATTCCTCTCTGTTGAATATTGCGGATAGTTACAAAGACTAA 1617 0.3946 MVGNDNNNSNKEKEKDLELLFEENDEDVNDDEQQDIEAVKFESESSSEGGSDDDGNDRTQLQSFTSQQWPQSYKETTDSYTIAAAPNFESILRGPSFLYSSVGNLSKSSLDIDGKTPFLSGQEGIINQSTWWEKASVQRHYTGELPIGYGCSFTQTVFNGINVMAGVGLLSTPYTVKEAGWMSMAVLLLFAVICCYTANLMRLCFETREGITSYPDIGEAAFGKYGRIVVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLQLDSMHLFGVLTALIILPTVWLKDLRIISFLSAGGVVATLLIIICLFSVGATDSVGFHHTGPLVNWSGIPFAIGIYGFCYAGHSVFPNIYQSMADKKQFTKALITCFVLCILIYGGVAIMGFLMFGDGTLSQITLNMPPGAFASKVALWTTVINKYALLMNPLARSLEELLPERISSTYWCFLLLRTVLVASTVCVAFLIPFFGLVMALIGSLFSILVSVIMPSLCFLKIVGKKATNTQVALSVTITALGIICGLLGSYSSLLNIADSYKD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2677g00002 538 MobiDBLite consensus disorder prediction 19 33 - -
Gabi2677g00002 538 Gene3D Amino acid/polyamine transporter I 150 535 - -
Gabi2677g00002 538 FunFam Amino acid transporter AVT1A 149 535 - -
Gabi2677g00002 538 Pfam Transmembrane amino acid transporter protein 152 526 IPR013057 -
Gabi2677g00002 538 MobiDBLite consensus disorder prediction 56 72 - -
Gabi2677g00002 538 PANTHER OS05G0424000 PROTEIN-RELATED 154 514 - -
Gabi2677g00002 538 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2677g00002 Gabi-Chr2677 26246 33948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2677g00002 26 471 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.103 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2677g00002 K15015 - gmx:100790344 862.062