Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2677g00001 ATGGTTGGTAACGACAATAACAACAGCAACAAGGAGAAGGAGAAAGACCTTGAGCTTTTGTTTGAGGAGAACGATGAAGATGTCAATGATGATGAACAACAGGATATTGAAGCTGTGAAGTTTGAGAGTGAGAGTAGCAGTGAAGGTGGCAGTGATGATGACGGAAATGATAGAACACAGCTTCAGTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTATACAATTGCTGCAGCTCCAAATTTTGAATCAATTCTTCGAGGACCAAGTTTTCTTTATTCCAGTGTTGGCAATCTTTCAAAGAGTAGCTTAGACATAGATGGAAAGACTCCTTTTCTATCTGGTCAGGAAGGCATTATTAATCAATCAACATGGTGGGAGAAAGCCTCAGTGCAAAGGCATTATACTGGAGAATTGCCCATTGGTTATGGATGCAGCTTCACTCAAACAGTTTTCAACGGGATTAATGTGATGGCTGGAGTTGGCCTTTTGTCTACACCTTATACAGTGAAAGAAGCTGGGTGGATGAGCATGGCGGTGTTGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCAACCTTATGAGACTCTGCTTTGAAACTAGAGAAGGAATCACAAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGTATAGTAGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGCGATAACCTCACTAGTTTGTTTCCTGGAACATCTTTAGATTTGGGTGGTTTACAGTTAGACTCCATGCACTTGTTTGGAGTTTTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTATAATATCTTTTCTATCAGCTGGAGGGGTTGTTGCAACCCTTTTGATTATTATTTGTTTGTTTAGTGTTGGTGCAACAGACAGTGTTGGATTCCATCACACTGGTCCATTGGTAAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTATGCAGGACATTCAGTTTTTCCAAATATATATCAGTCTATGGCTGACAAAAAACAATTCACCAAAGCACTAATAACATGTTTTGTTTTGTGTATTTTGATATATGGAGGCGTTGCAATCATGGGATTTCTCATGTTTGGCGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCTGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCTTTGACTAAATATGCTTTGTTGATGAACCCACTAGCAAGAAGTCTAGAGGAGTTGCTACCAGAAAGAATTTCGAGTACTTATTGGTGCTTCCTTCTTCTTAGAACAGTACTTGTTGCATCTACAGTTTGTGTTGCTTTTCTTATCCCCTTTTTTGGGCTTGTGATGGCTTTGATTGGTTCTCTCTTCAGTATACTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGGAAAAAGGCTACAAATACCCAGATTCTCCAAAAAGGTGCCTACTATGGCAATCATGATGTCAAAGTAGAAAAAGTGGAGAATCACATAAAAGAGGAGAAAACTGTTGCAAAGTGA 1620 0.3907 MVGNDNNNSNKEKEKDLELLFEENDEDVNDDEQQDIEAVKFESESSSEGGSDDDGNDRTQLQSFTSQQWPQSYKETTDSYTIAAAPNFESILRGPSFLYSSVGNLSKSSLDIDGKTPFLSGQEGIINQSTWWEKASVQRHYTGELPIGYGCSFTQTVFNGINVMAGVGLLSTPYTVKEAGWMSMAVLLLFAVICCYTANLMRLCFETREGITSYPDIGEAAFGKYGRIVVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLQLDSMHLFGVLTALIILPTVWLKDLRIISFLSAGGVVATLLIIICLFSVGATDSVGFHHTGPLVNWSGIPFAIGIYGFCYAGHSVFPNIYQSMADKKQFTKALITCFVLCILIYGGVAIMGFLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPERISSTYWCFLLLRTVLVASTVCVAFLIPFFGLVMALIGSLFSILVSVIMPSLCFLKIVGKKATNTQILQKGAYYGNHDVKVEKVENHIKEEKTVAK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2677g00001 539 MobiDBLite consensus disorder prediction 19 33 - -
Gabi2677g00001 539 MobiDBLite consensus disorder prediction 56 72 - -
Gabi2677g00001 539 FunFam Amino acid transporter AVT1A 149 516 - -
Gabi2677g00001 539 Pfam Transmembrane amino acid transporter protein 152 509 IPR013057 -
Gabi2677g00001 539 PANTHER OS05G0424000 PROTEIN-RELATED 154 501 - -
Gabi2677g00001 539 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2677g00001 Gabi-Chr2677 26244 36331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2677g00001 26 474 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.522 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2677g00001 K15015 - gmx:100790344 831.247