Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2675g00023 ATGGATACATCAAATCCTGCAATCTTTGTCAATGCAGAACTTTTACACTATTACGTTGGAAGGAGGGTTCGGGCAGTCATGCAGGTTGTGCGATCTGACAGTGGAGCTGTCATTGGAAAATCTACGGATGAGAAGCAGCTAGTTGTAAAAGGATCACACCCACCTGCTCCTCTCACAAAATTTGTCGAAGTTATTGGTATTGTTGACAACGATAAGTCCATTCGTGCTGAAATATGGACCAATTTTGGTGATGCAATTGATATGGTCAGCTATGATAAGCTTTGTAAGCTTGCAAATGGAGAATTTAAACATTTATTCCTGTGA 324 0.4043 MDTSNPAIFVNAELLHYYVGRRVRAVMQVVRSDSGAVIGKSTDEKQLVVKGSHPPAPLTKFVEVIGIVDNDKSIRAEIWTNFGDAIDMVSYDKLCKLANGEFKHLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2675g00023 107 Pfam Replication factor A protein 3 1 103 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gabi2675g00023 107 CDD RPA3 6 99 - -
Gabi2675g00023 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Gabi2675g00023 107 Gene3D - 1 107 IPR012340 -
Gabi2675g00023 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2675g00023 Gabi-Chr2675 204386 206460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2675g00023 1 107 Core DNA Replication Machinery Family AT4G18590 65.421 1.46e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2675g00023 K10740 - gmx:100306641 175.637