Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2674g00002 ATGGAGATGGAGATGGAGATGAGAGCCATGGAAGACATTGAATTAGGCCAAGACATAACCCAAACACTAGCCCCTCTCACTTTCTCTCTCCACAATTCTCATATCCACACTCACTGCTCTGCTTGTTTCTCTCTCCTATCTTCAACTTCTGTTTCCAATCTCAATCTCAATCCCAATCCTCTTTCACCCTTCTACTGTTCCCCTCCATGCTCCGCCGCCCATTCCTCCCTCCACATCTCCTCCGCCGAGCGCCACCTCCCTCCTTCCGCCGACTCCTGCGACCTCCGTGCCGCCCTCCGCCTCCTCAGCAACCACCGTCCCGCCGCATCGGGTCGGGTCGCCGGGTTACTCTCCAACCGCCAAGAGCTGACGTGTCAAAATCCCTCCCACGACGACGACACCGTTTTGGAGGTCTTTGAGAAAATCAGGGTCGGCGCCAGTGCCATGGCTGCAGCGATAGCGAAGCAGCGTGGCTGCAAAAACGACGACGCCGTTTTAGAGGAAGCGACGGTTGCTCTCTGCGCGGTGCTAACGAACGCCGTGGAGGTGCAGGATAACGAAGGGCGCACCCTTGGGATCGCGGTTTTCGACACCACCTTCTCTTGGATTAACCATAGTTGTTCCCCCAACGCATGCTACCGCTTCACACTCTCTTCTTCTTCTTCGTCTTCGCCTTCTGAGAAACACAAACTTCTCATAGGCCCATTCACTCGCCATTCTCAACAACCACTAATAGATAGCGGGGTTTGTGGCAGTAGCAGTAGTGAACTTGCAAAAGAAGGGGAGCTGGGCTATGGTCCAAGATTGATTGTGAGGAGTATCAAGAGAATAAAGAGGGGAGAAGAGGTCACTGTAGCATATACTGATCTCTTGCAACCTAAGGCATTGAGACAATTGGAGCTATGGTCAAAGTATCGGTTTATTTGTTATTGCAAACGATGTAGTCCTCTGCACTTCACATATGTGGATCGTGCATTGCAAGTAAGACTTTAA 993 0.5186 MEMEMEMRAMEDIELGQDITQTLAPLTFSLHNSHIHTHCSACFSLLSSTSVSNLNLNPNPLSPFYCSPPCSAAHSSLHISSAERHLPPSADSCDLRAALRLLSNHRPAASGRVAGLLSNRQELTCQNPSHDDDTVLEVFEKIRVGASAMAAAIAKQRGCKNDDAVLEEATVALCAVLTNAVEVQDNEGRTLGIAVFDTTFSWINHSCSPNACYRFTLSSSSSSSPSEKHKLLIGPFTRHSQQPLIDSGVCGSSSSELAKEGELGYGPRLIVRSIKRIKRGEEVTVAYTDLLQPKALRQLELWSKYRFICYCKRCSPLHFTYVDRALQVRL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2674g00002 330 PANTHER PROTEIN SET DOMAIN GROUP 41 5 327 - -
Gabi2674g00002 330 Pfam SET domain 200 287 IPR001214 GO:0005515
Gabi2674g00002 330 CDD SET_SMYD 163 314 - -
Gabi2674g00002 330 Gene3D SET domain 137 316 IPR046341 -
Gabi2674g00002 330 SUPERFAMILY SET domain 179 315 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2674g00002 Gabi-Chr2674 18451 21556 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi2674g00002 SET 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2674g00002 - - aprc:113867790 433.721