Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00055 ATGACTGAAATCGATGTCTTGATGAGGCTAGCCAGACATGATGTTCATGGTTCACATTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATTGTTCTTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTCATGCATGATTTATGCTTGATTCACACTGATTTGAAGCCAGAGAACATTCTTCTTGTCTCATCAGAATTTACTGAAGTGCCAGACTGCAAGTTTCTGTCGCGGACCGCAAAAGATTGCTCCTATTTCAAGAATCTACCGAAGTCAAGTGCCATTAAGCTCATCGATTTTGGGAGTACAACATTTGAACATCAGGATCACAGTTATGTGGTGTCAACAAGACACTATCGTGCGCCAGAAGTTATCTTAGGTCTTGGGTGGAACTATCCTTGCGACCTTTGGAGTGTAGGCTGCATACTTGTTGAGCTTTGCTCTGGTGAGGCACTTTTCCAAACACATGAGAACTTGGAACATCTTGCCATGATGGAGAGAGTTTTAGGGCCACTACCTCCGCATATGGTGGGCAGGGCTGATCGTCGAGCTGAGAAGTATTTTAAAAGAGGTGCACGAGTAGGTTGGCCTGATAGTTCAACTTCAAGAGAAAGCATGAGGGCAGTTTGGAAATTGCCGCGTTTGCCGAACCTTATAATGCAGCATGTTGATCATTCTGCTGGCGATTTGATTGACCTCTTGCAAGGGCTTCTGCGGTATGACCCTGCAGAACGGCTTAAAGCAAGGGAAGCATTAAGACATCCCTTTTTCTGCACAAGAGATCCTAAAAGATATGGTTACCCTTTATAA 900 0.4333 MTEIDVLMRLARHDVHGSHCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYCSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLVSSEFTEVPDCKFLSRTAKDCSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVGRADRRAEKYFKRGARVGWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFCTRDPKRYGYPL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00055 299 Gene3D Phosphorylase Kinase; domain 1 2 39 - -
Gabi2670g00055 299 ProSiteProfiles Protein kinase domain profile. 1 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00055 299 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Gabi2670g00055 299 FunFam Serine/threonine-protein kinase AFC2 35 287 - -
Gabi2670g00055 299 SMART serkin_6 1 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00055 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Gabi2670g00055 299 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 289 - -
Gabi2670g00055 299 Gene3D Transferase(Phosphotransferase) domain 1 13 287 - -
Gabi2670g00055 299 CDD PKc_CLK 1 287 - -
Gabi2670g00055 299 Pfam Protein kinase domain 2 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00055 Gabi-Chr2670 319722 323942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00055 3 287 Core Cell Cycle Gene Families AT1G76540 26.531 3.37e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Gabi2670g00055 Pkinase 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00055 K08287 - gmx:100808061 578.17