Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00038 ATGGGGAAGGGAGGCGAAGATTATGGGAAACAAGAGAACACGAGTTCTGAGAATTCGGACCGTGAAATCTTCAAGGCGTGGGCTAAGGATGTGCGTGAATGCGAGGAACACTACAAGGTGAGAGTGAAATCGGGGTTGAATAGCAACGAGGTTGAGAATCGGCGCCGGATCTATGGCTCGAACGAACTTGAGAAGCACGAGGGCCAGTCTATTTGGAGTCTTATTCTCGAACAGTTCAACGATACCTTGGTTCGGATTCTGCTCGCCGCCGCCATCATATCCTTCGTCCTGGCATGGTACGACGGCGACGAAGGCAGCGAGATGGAGATTACTGCTTTTGTGGAGCCTCTGGTGATATTCCTGATATTGATTGTGAACGCAATCGTTGGAGTATGGCAAGAGAGTAATGCGGAGAAGGCGCTTGAGGCTCTGAAGGAAATTCAATCGGAACACGCCATGGTGATTCGAGATAACGTGAAAATCCCTAATTTGCCAGCTAAGGATCTTGTGCCTGGTGATATTGTCGAGCTTAAGGTTGGGGATAAGGTGCCTGCAGATATGCGTGTTGTGGAATTGGTTAGCTCCACTTTGCGATTGGAGCAGGGCTCCTTGACTGGAGAGAGTGAAGCAGTTAATAAGTCTAACAAACCTGTTTCTGAACCTGCTGATATCCAAGGCAAGAGGTGTATGGTTTTCGCGGGGACGACTGTTGTTAACGGGAATTGTATTTGCTTGGTCACTCAGACCGGCATGGAAACCGAGATTGGGAAGGTGCATACACAGATACACGTTGCGTCCCAGAGTGAGGAGGATACACCCTTGAAGAAGAAGCTCAATGAATTTGGAGAGAGGCTAACCATAATGATTGGATTGATATGTCTATTGGTTTGGCTCATCAACGTTAAGTACTTCCTTACCTGGGAGTATGTGGATGGATGGCCGAGGAACTTCAAGTTTTCATTTGAGAAGTGTACGTATTACTTTGAGATTGCTGTGGCGTTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCTGCAGTCATCACCACTTGCCTCGCCCTAGGTACTCGCAAGATGGCCCAGAAGAATGTCCTGGTTCGGAAGCTAGCTAGCGTGGAAACTCTGGGTTGTACAACTGTTATTTGTTCAGATAAAACTGGTACTTTGACTACTAACCAGATGGCTGTGTCAAAACTAGTAGCTATTGGCCCTAACGTAGACACACTGCGGGCCTTCAAGGTGGAAGGAACTACATACAATCCATCTGATGGTAAAATAGAGAACTGGCTAACAGGTAAATTGGATGCTAATCTTCAGATGATAGCAAAAATAGCTGCTGTCTGTAATGATGCTGGAGTCACACAATCAGAGCATAAGTTTGTTGCCCATGGAATGCCTACTGAAGCAGCATTAAAGGTTTTGGTAGAGAAGATGGGCCTTCCTGAAGGATCCAAGGATGTACGATCAGCAAGCTTACTACGTAAGTTGAATCTTTTTGTCAAAAGTAATTCAAATTTTAATATAGGCTGTTGTGAATGGTGGAATGAACATGACCGACGGATTGCTACTCTTGAGTTTGACCGTGATCGGAAGTCTATGGGTGTTATTGTGGACTCTGGTCTAGGGAAAAGGTTTCTTCTGGTTAAGGGTGCTGTGGAAAATGTGTTGGAAAGAAGCTCTAAAATTCAGTTGCGTGATGGTTCCATTGTGAAACTGGACAATAATGCTAGGAATCTCATTTTGCAAGCTCTTCATGAAATGTCAACTAGTGCTTTACGATGTTTGGGATTTGCGTACAAGGATGAGCTAAGTGCATTTGAAAACTACAGTGGTAATGACGATCATCCAGCTCACCAGCTTTTGCTTAATCCCTCCAACTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGGTTGAGGGATCCTCCTAGGGAGGAGGTATACCAAGCAATTGAGGACTGCAGAGCAGCTGGAGTTCGTGTTATGGTTATAACTGGAGACAACAAGAACACTGCTGAAGCTATATGCCGTGATATAGGTGTATTTGAACGCAATGAAGACATTAGTTCGAAAAGTTTAACTGGTAAAGATTTTATGGAACTGCGTGATAAAAAAGCCTATCTGAAGCAGCGTGGCGGGCTTTTATTTTCGAGGGCTGAACCTAGGCACAAGCAAGACATTGTGAGGCTGCTAAAAGAGGAAGGGGAAGTGGTAGCCATGACTGGGGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCAGACATTGGTGTTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGATAATTTTAGTTCAATTGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAATATGAAGGCTTTTATCAGGTACATGATCTCTTCGAACATTGGTGAGGTTGCTTCTATTTTTCTAACAGCTGCGCTCGGTATTCCTGAAGGATTGATACCTGTTCAGCTTCTGTGGGTTAATCTTGTCACTGATGGACCCCCTGCTACAGCTTTGGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAGTTTGTGGATTCTAGTCCGCTATCTGATTATTGGGATTTATGTTGGATTAGCTACAGTTGGTGTATTCATCATATGGTATACACATGGCTCCTTCTTGGGTATTGACCTTAGCGGGGATGGGCATACTCTCGTCACTTACTCCCAACTTTCCAACTGGGGTCAATGCTCCTCGTGGAAGAACTTCACTGCATCTCCCTTCACCGCTGGTGCTAGAACTCTCTCTTTTGATGCTGACCCCTGTGACTACTTCCACACTGGTAAAGTGAAGGCTATGACACTGTCCCTCTCTGTGTTGGTATCCATTGAAATGTTCAACTCTCTCAATGCCCTGTCTGAAGATGGAAGTCTTTTGACAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCTGTGTCATTTGGTTTGCACTTTTTGATCTTGTACGTGCCATTCTTAGCACAAGTATTTGGTATCGTGCCCCTGAGCTTCAATGAGTGGCTTTTGGTTTTGGCCGTTGCATTACCTGTCATTCTAGTTGACGAGATTCTGAAATTCGTGGGGAGGTGTACAAGTGCGTCTCAAGCATCAAGTCCAAGAAGATCAAAGCAAAAGTCAGAGTAG 3225 0.4512 MGKGGEDYGKQENTSSENSDREIFKAWAKDVRECEEHYKVRVKSGLNSNEVENRRRIYGSNELEKHEGQSIWSLILEQFNDTLVRILLAAAIISFVLAWYDGDEGSEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHAMVIRDNVKIPNLPAKDLVPGDIVELKVGDKVPADMRVVELVSSTLRLEQGSLTGESEAVNKSNKPVSEPADIQGKRCMVFAGTTVVNGNCICLVTQTGMETEIGKVHTQIHVASQSEEDTPLKKKLNEFGERLTIMIGLICLLVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNVLVRKLASVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGPNVDTLRAFKVEGTTYNPSDGKIENWLTGKLDANLQMIAKIAAVCNDAGVTQSEHKFVAHGMPTEAALKVLVEKMGLPEGSKDVRSASLLRKLNLFVKSNSNFNIGCCEWWNEHDRRIATLEFDRDRKSMGVIVDSGLGKRFLLVKGAVENVLERSSKIQLRDGSIVKLDNNARNLILQALHEMSTSALRCLGFAYKDELSAFENYSGNDDHPAHQLLLNPSNYSSIESELIFVGLVGLRDPPREEVYQAIEDCRAAGVRVMVITGDNKNTAEAICRDIGVFERNEDISSKSLTGKDFMELRDKKAYLKQRGGLLFSRAEPRHKQDIVRLLKEEGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISLWILVRYLIIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHTLVTYSQLSNWGQCSSWKNFTASPFTAGARTLSFDADPCDYFHTGKVKAMTLSLSVLVSIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLAVALPVILVDEILKFVGRCTSASQASSPRRSKQKSE 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00038 1074 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 641 IPR023299 GO:0000166
Gabi2670g00038 1074 Pfam haloacid dehalogenase-like hydrolase 378 757 - -
Gabi2670g00038 1074 PANTHER CALCIUM-TRANSPORTING ATPASE 27 1062 - -
Gabi2670g00038 1074 Gene3D - 378 788 IPR023214 -
Gabi2670g00038 1074 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Gabi2670g00038 1074 Pfam Cation transporting ATPase, C-terminus 828 1054 IPR006068 -
Gabi2670g00038 1074 Pfam E1-E2 ATPase 147 361 - -
Gabi2670g00038 1074 FunFam Calcium-transporting P-type ATPase, putative 639 788 - -
Gabi2670g00038 1074 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Gabi2670g00038 1074 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 807 1061 - -
Gabi2670g00038 1074 Gene3D - 391 644 IPR023299 GO:0000166
Gabi2670g00038 1074 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 644 - -
Gabi2670g00038 1074 NCBIfam HAD-IC family P-type ATPase 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2670g00038 1074 NCBIfam HAD-IC family P-type ATPase 717 824 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2670g00038 1074 NCBIfam HAD-IC family P-type ATPase 118 229 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2670g00038 1074 FunFam Calcium-transporting ATPase, putative 127 263 - -
Gabi2670g00038 1074 SFLD C1.7: P-type atpase like 362 795 - -
Gabi2670g00038 1074 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2670g00038 1074 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 637 648 - -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 743 762 - -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 659 669 - -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Gabi2670g00038 1074 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Gabi2670g00038 1074 SFLD p-type atpase 362 795 IPR044492 -
Gabi2670g00038 1074 Gene3D - 77 1056 - -
Gabi2670g00038 1074 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 241 408 - -
Gabi2670g00038 1074 Gene3D - 45 265 - -
Gabi2670g00038 1074 SUPERFAMILY HAD-like 379 847 IPR036412 -
Gabi2670g00038 1074 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1056 IPR023298 -
Gabi2670g00038 1074 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00038 Gabi-Chr2670 161572 168686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00038 1 1074 Primary Pumps ATPases(2) AT1G07670 78.273 0.0 1727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00038 K01537 - gmx:100788807 1910.58