Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00037 ATGACCCATGCCATGCCATGCACTTCTCCTAGCTCCCCAACAACTACACGAATGTCACGCCGAACACAACCCCCACCACCCAACCCCCCCGTCGCCGACGACAGGCTCCCTTTCTTCGACCAATCCATGGAGCTGGTTCAACACCCCTATCCATCCAGAAACATAACCAAAACCAATCTCTCTCCCACCCTCGGCGAGCTCCTCAAACGCGTGGAAGATGCTCAAAACGACAACTCCGACGACAAAACTGTTGTTGCACCCCACCATGTTCTCGACCTCTCCTCTTCCTCCACCTCCTCTCACCCTTTTGTTCTTTCCTTCAACAACTTAACTTACAGCGTCAGGCTCCGCAGCAAGATGACCCTCTCTCCCTGCTTTTCCTCTACCAACGCCACCAACCCGAACTCCCCGGCGGCAAACGAGGAGGCCGAAACCAAAACCAACGACACCAAGATTCTTCTCAACGATATCTCCGGCGAGGCCAGGGACGGCGAGATCATGGCCGTTCTGGGAGCCAGCGGCTCAGGCAAGTCGACGCTGATCGACGCGCTCGCGTACCGGATTTCGAAGGAGAGCCTCAAAGGGACCATGACCTTAAACGGCGACGTTGTGGAATCGAGTCTCCTGAAGGTGATATCAGCTTACGTCATGCAAGACGATCTCCTCTTCCCCATGCTCACCGTAGAGGAAACCCTCATGTTCTCCGCCGAGTTCAGGCTCCCTCGTTCACTCTCCAAATCCAAGAAGAAGGCTCGAGTCCAAGCCCTCATCGACCAGCTCGGCCTCCGCAACGCCGCGAAAACTGTCATCGGCGACGAAGGTCACCGCGGCGTCTCCGGCGGAGAACGCCGCCGCGTCTCGATCGGAATCGACATCATCCACGACCCGATCGTGTTGTTCCTGGACGAACCAACCTCCGGGCTGGACTCCACCAGCGCCTTCATGGTGGTGAAGGTGCTGCAGCGAATAGCTCAGAGCGGTAGCATCGTGATCATGTCCATACACCAACCCAGCTACAGAATCCTCGGCTTACTGGACCGCTTGATCTTCCTCTCCCACGGCCAAACCGTCTTCAGCGGCTCTCCGGCGACAGTCCCCGTCTTCTTCTCGGAGTTCGGACACCCCATACCGGAAAACGAGAACCGAACAGAATTCGCATTAGACCTAATCCGCCAGCTGGAAGAATCACCCGACGGGACCAAAAGCCTAGTCGAGTTCAACAAGTCATGGCAGTTGAAAAACAAACCCTCTTCTCAAAAAACCACCAACGGCTCAAAGCTCTCACTGAAAGACGCCATCAGCGCAAGCATTTCAAGGGGGAAATTAGTGTCCGGCGCTAACAATAACAACAAAGACTCAACGACGTCGTCGTCAGTTCCCACCTTCGCCAATCCTTTTTGGATCGAAATGGCGGTTATAGCAAAACGGTCTCTAACTAACTCAAGGAGAATGCCCGAATTATTCGGAATCCGTTTGGGTGCAGTTATGGTAACCGGAGGGATCCTGGCCACTATCTTTTTTCACCTTGATGATTCCCCCAAAGGTGTTCAAGAACGTTTAGGGTTCTTCGCTTTTGCCATGTCAACAACCTTCTACACGTGTGCAGAAGCCATCCCTGTCTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCTTACAATGCCTATCGTCGCTCTTCCTATGTTCTCGCACACTCCATCATCTCTCTCCCTTCACTCATCTTCCTCTCCCTCGCCTTCGCCGCCACCACCTTCTGGGCGGTGGGGCTCGCCGGCGGAACTTCCGGCTTCCTGTTCTACTTCTTCACCATCGTAGCTTCCTTCTGGGCGGGTAGCTCCTTCGTGACGTTCCTCTCTGGGGTCGTGTCTCACGTGATGCTTGGTTTCACGGTGGTGGTTGCTATCTTGGCTTACTTTCTCCTCTTCAGTGGGTTCTTCATAAGCAGAGACAGGATCCCTCCTTATTGGATATGGTTTCACTACCTTTCGTTGGTGAAGTACCCTTACGAGGGGGTTTTGCAGAACGAGTTCGATGTTCGGCCTCCGAGGTGTTTCGTGAGGGGGATTCAGATGTTTGACAACACACCGTTGGTGGATGTGCCGGCGGAGCTGAAGGTGGAGTTGCTGAAGAGCATGAGCAGCACGTTGGGGATTAACATCACGAGCTCCACGTGCGTCGTCACGGGAGTGGATATACTGAGGCAACAGGGGGTCACGCAGCTCAGCAAATGGAACTGCTTGTTGATCACCATTGCTTGGGGCTTCTTCTTTCGCTTCCTCTTTTATTTAACCTTGCACTTTGGGAGCAAGAACAAGAGGCGGTAG 2328 0.5395 MTHAMPCTSPSSPTTTRMSRRTQPPPPNPPVADDRLPFFDQSMELVQHPYPSRNITKTNLSPTLGELLKRVEDAQNDNSDDKTVVAPHHVLDLSSSSTSSHPFVLSFNNLTYSVRLRSKMTLSPCFSSTNATNPNSPAANEEAETKTNDTKILLNDISGEARDGEIMAVLGASGSGKSTLIDALAYRISKESLKGTMTLNGDVVESSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPATVPVFFSEFGHPIPENENRTEFALDLIRQLEESPDGTKSLVEFNKSWQLKNKPSSQKTTNGSKLSLKDAISASISRGKLVSGANNNNKDSTTSSSVPTFANPFWIEMAVIAKRSLTNSRRMPELFGIRLGAVMVTGGILATIFFHLDDSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPSLIFLSLAFAATTFWAVGLAGGTSGFLFYFFTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFDVRPPRCFVRGIQMFDNTPLVDVPAELKVELLKSMSSTLGINITSSTCVVTGVDILRQQGVTQLSKWNCLLITIAWGFFFRFLFYLTLHFGSKNKRR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00037 775 Pfam ABC-2 type transporter 472 678 IPR013525 GO:0016020|GO:0140359
Gabi2670g00037 775 MobiDBLite consensus disorder prediction 1 36 - -
Gabi2670g00037 775 Gene3D - 142 367 IPR027417 -
Gabi2670g00037 775 FunFam ABC transporter G family member 6 143 369 - -
Gabi2670g00037 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 365 IPR027417 -
Gabi2670g00037 775 SMART AAA_5 163 378 IPR003593 GO:0016887
Gabi2670g00037 775 Pfam ABC transporter 154 306 IPR003439 GO:0005524
Gabi2670g00037 775 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 139 378 IPR003439 GO:0005524
Gabi2670g00037 775 ProSitePatterns ABC transporters family signature. 278 292 IPR017871 GO:0005524|GO:0016887
Gabi2670g00037 775 MobiDBLite consensus disorder prediction 1 19 - -
Gabi2670g00037 775 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 89 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00037 Gabi-Chr2670 157097 159513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00037 153 338 Calmodulin-binding Proteins AT2G36910 30.159 3.19e-11 65.5