Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00020 ATGGTTAGATCCTGCTGGAAACCAAGTGGAGAAGGTGATGATGAGCTGCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTAATTCAAGCCAATAGTTCATTGGAGGATTGTAGCCAACTCGAATCTGGACCCTTGAGTTCTGATTACTTGGGTCCTCAAGGGACCTTTGTTGGTGTATATGATGGTCATGGTGGAACTGCAGCCTCGCAGTTTGTCAGTGACAATCTTTTCTGCAATTTCAAGAGTTTTGCTGCTGAACATCAAGGTATTTCAGAACATGTTATCAGAAGGGCCTTTTCAACAACAGAAGAGGGTTTTCTCTCTCTTGTTAAGAAACAGTGGCTAAGCAAGCCACAGATTGCATACACGGGTTCATGTTGTTTGGCGGGGATAATTTGCAATGGCATGCTATATATTGCAAACGCTGGAGACTCAAGGGCAGTGTTAGGAAGAATAGAGAGGGCAACAAGGGAAACATTAGCTATTCAATTATCTACAGAACACAACGTTAACATAAAAACAGAGAGAGATGAACTTCTTTCAAAGCACCCTCATGATTCACAAATCGTGGTTATGAAGCATAGAGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAGGGAGCCTTTACCATATAAGTTTAGACTACATGAACCCTTCTCCAAGCCAATTCTAAGTTATGAACCATCAATATCAATGCATAAACTCCATCCCGACGATCAATTTATCATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGAGGCTGTTAATATAGTCAGCAATAACCCACGCAATGGAATTGCTAGGCGGCTTGTGAAAGCTGCACTTCGAGAAGCAGCTAAGAAGAGAGAAATGAGATTCTCAGACCTCCAAAAGATTGAACAAGGGGTTAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATTTCTAAATCCCAAACTGATTGATAATAGTTCTCTCTGGGGTTCTCCTCTTTCAATCAGAGGAGGTGGACCTGCCAATTCTTAG 1089 0.416 MVRSCWKPSGEGDDELLWYKDLGNHLYGEFSMAVIQANSSLEDCSQLESGPLSSDYLGPQGTFVGVYDGHGGTAASQFVSDNLFCNFKSFAAEHQGISEHVIRRAFSTTEEGFLSLVKKQWLSKPQIAYTGSCCLAGIICNGMLYIANAGDSRAVLGRIERATRETLAIQLSTEHNVNIKTERDELLSKHPHDSQIVVMKHRVWRVKGLIQVSRSIGDAYLKKAEFNREPLPYKFRLHEPFSKPILSYEPSISMHKLHPDDQFIIFASDGLWEHLSNQEAVNIVSNNPRNGIARRLVKAALREAAKKREMRFSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNSSLWGSPLSIRGGGPANS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00020 362 Gene3D - 20 346 IPR036457 -
Gabi2670g00020 362 CDD PP2Cc 27 337 IPR001932 -
Gabi2670g00020 362 PANTHER PROTEIN PHOSPHATASE 27 335 IPR015655 GO:0004722|GO:0006470
Gabi2670g00020 362 SUPERFAMILY PP2C-like 38 338 IPR036457 -
Gabi2670g00020 362 FunFam Phosphatase 2C family protein 18 347 - -
Gabi2670g00020 362 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Gabi2670g00020 362 ProSiteProfiles PPM-type phosphatase domain profile. 26 337 IPR001932 -
Gabi2670g00020 362 Pfam Protein phosphatase 2C 60 306 IPR001932 -
Gabi2670g00020 362 SMART PP2C_4 23 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00020 Gabi-Chr2670 100358 103425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00020 1 358 PP2C-type Phosphatase Gene Family AT3G12620 65.854 1.33e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00020 K01102 - gmx:100815902 587.03