Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2670g00012 | ATGGGTTGGATTCCCTGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGAAAAGATGGAAAATATACCAAGTTTAAAGAATTCATCTACAAATTCCAAAGATACATCTAAAAATGGGAACCCTGATCACATTGCTGCACAGACTTTCTCTTTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTGTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAGTATTAATCAGGTTGTTGCAATTAAGCAACTAGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCCTGGCAAGAAACGACTTGACTGGAATACACGAATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATATCTGCATGACAAAGCTAATCCTCCTGTCATATACCGTGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGTTATCACCCGAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAGAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCCATTGATAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATAGAAGAAAATTTTCACAAATGGCTGATCCAATGCTACAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAGGCTAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCATACCTTGCTTTACACAGATATGATCCCAATACACAGACAGCTCAAAGCTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAGGAGAGGGCAGTGA | 1104 | 0.4203 | MGWIPCSGNSGTKKKIEKMENIPSLKNSSTNSKDTSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALHRYDPNTQTAQSSRLAPGTPPRTRRGQ | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2670g00012 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 43 | 335 | IPR011009 | - | |
Gabi2670g00012 | 367 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 137 | - | - | |
Gabi2670g00012 | 367 | CDD | STKc_IRAK | 67 | 335 | - | - | |
Gabi2670g00012 | 367 | SMART | serkin_6 | 61 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2670g00012 | 367 | MobiDBLite | consensus disorder prediction | 348 | 367 | - | - | |
Gabi2670g00012 | 367 | FunFam | Serine/threonine-protein kinase PBS1 | 138 | 353 | - | - | |
Gabi2670g00012 | 367 | FunFam | Serine/threonine-protein kinase PBS1 | 33 | 137 | - | - | |
Gabi2670g00012 | 367 | Pfam | Protein tyrosine and serine/threonine kinase | 65 | 334 | IPR001245 | GO:0004672|GO:0006468 | |
Gabi2670g00012 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi2670g00012 | 367 | ProSiteProfiles | Protein kinase domain profile. | 61 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2670g00012 | 367 | ProSitePatterns | Protein kinases ATP-binding region signature. | 67 | 90 | IPR017441 | GO:0005524 | |
Gabi2670g00012 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 138 | 354 | - | - | |
Gabi2670g00012 | 367 | PANTHER | OS07G0668900 PROTEIN | 17 | 347 | - | - | |
Gabi2670g00012 | 367 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Gabi2670g00012 | 367 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2670g00012 | Gabi-Chr2670 | 64963 | 68627 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2670g00012 | 23 | 338 | Glycoside Hydrolase | AT3G07070 | 69.304 | 4.97e-164 | 463 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Gabi2670g00012 | PK_Tyr_Ser-Thr | 5.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2670g00012 | - | - | gmx:100793549 | 685.256 |