Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00012 ATGGGTTGGATTCCCTGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGAAAAGATGGAAAATATACCAAGTTTAAAGAATTCATCTACAAATTCCAAAGATACATCTAAAAATGGGAACCCTGATCACATTGCTGCACAGACTTTCTCTTTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTGTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAGTATTAATCAGGTTGTTGCAATTAAGCAACTAGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCCTGGCAAGAAACGACTTGACTGGAATACACGAATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATATCTGCATGACAAAGCTAATCCTCCTGTCATATACCGTGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGTTATCACCCGAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAGAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCCATTGATAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATAGAAGAAAATTTTCACAAATGGCTGATCCAATGCTACAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAGGCTAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCATACCTTGCTTTACACAGATATGATCCCAATACACAGACAGCTCAAAGCTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAGGAGAGGGCAGTGA 1104 0.4203 MGWIPCSGNSGTKKKIEKMENIPSLKNSSTNSKDTSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALHRYDPNTQTAQSSRLAPGTPPRTRRGQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00012 367 SUPERFAMILY Protein kinase-like (PK-like) 43 335 IPR011009 -
Gabi2670g00012 367 Gene3D Phosphorylase Kinase; domain 1 31 137 - -
Gabi2670g00012 367 CDD STKc_IRAK 67 335 - -
Gabi2670g00012 367 SMART serkin_6 61 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00012 367 MobiDBLite consensus disorder prediction 348 367 - -
Gabi2670g00012 367 FunFam Serine/threonine-protein kinase PBS1 138 353 - -
Gabi2670g00012 367 FunFam Serine/threonine-protein kinase PBS1 33 137 - -
Gabi2670g00012 367 Pfam Protein tyrosine and serine/threonine kinase 65 334 IPR001245 GO:0004672|GO:0006468
Gabi2670g00012 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Gabi2670g00012 367 ProSiteProfiles Protein kinase domain profile. 61 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00012 367 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Gabi2670g00012 367 Gene3D Transferase(Phosphotransferase) domain 1 138 354 - -
Gabi2670g00012 367 PANTHER OS07G0668900 PROTEIN 17 347 - -
Gabi2670g00012 367 MobiDBLite consensus disorder prediction 1 42 - -
Gabi2670g00012 367 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00012 Gabi-Chr2670 64963 68627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00012 23 338 Glycoside Hydrolase AT3G07070 69.304 4.97e-164 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2670g00012 PK_Tyr_Ser-Thr 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00012 - - gmx:100793549 685.256