Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00010 ATGGGTTGGATTCCCTGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGAAAAGATGGAAGTGCAGGACAGCCACGTTGGTCAGATCAAAGCCAACCCAGGGAAATTGAAGAGGAATTCATCTACAAATTCCAAAGATACATCTAAAAATGGGAACCCTGATCACATTGCTGCACAGACTTTCTCTTTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTGTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAGTATTAATCAGGTTGTTGCAATTAAGCAACTAGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCCTGGCAAGAAACGACTTGACTGGAATACACGAATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATATCTGCATGACAAAGCTAATCCTCCTGTCATATACCGTGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGTTATCACCCGAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAGAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCCATTGATAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATAGAAGAAAATTTTCACAAATGGCTGATCCAATGCTACAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAGGCTAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCATACCTTGCTTTACACAGATATGATCCCAATACACAGACAGCTCAAAGCTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAGGAGAGGGCAGTGA 1140 0.4289 MGWIPCSGNSGTKKKIEKMEVQDSHVGQIKANPGKLKRNSSTNSKDTSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALHRYDPNTQTAQSSRLAPGTPPRTRRGQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00010 379 MobiDBLite consensus disorder prediction 360 379 - -
Gabi2670g00010 379 PANTHER OS07G0668900 PROTEIN 23 359 - -
Gabi2670g00010 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Gabi2670g00010 379 FunFam Serine/threonine-protein kinase PBS1 45 149 - -
Gabi2670g00010 379 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Gabi2670g00010 379 SUPERFAMILY Protein kinase-like (PK-like) 55 347 IPR011009 -
Gabi2670g00010 379 CDD STKc_IRAK 79 347 - -
Gabi2670g00010 379 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00010 379 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Gabi2670g00010 379 Gene3D Transferase(Phosphotransferase) domain 1 150 366 - -
Gabi2670g00010 379 MobiDBLite consensus disorder prediction 1 54 - -
Gabi2670g00010 379 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00010 379 MobiDBLite consensus disorder prediction 34 54 - -
Gabi2670g00010 379 Pfam Protein tyrosine and serine/threonine kinase 77 346 IPR001245 GO:0004672|GO:0006468
Gabi2670g00010 379 FunFam Serine/threonine-protein kinase PBS1 150 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00010 Gabi-Chr2670 64963 68627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00010 32 350 Glycoside Hydrolase AT3G07070 68.966 2.54e-165 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2670g00010 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00010 - - gmx:100793549 724.546