Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00009 ATGGGTTGGATTCCCTGTTCTGGAAATTCAGGCACTAAGAAGAAGATTGAAAAGATGGAAGTGCAGGACAGCCACGTTGGTCAGATCAAAGCCAACCCAGGGAAATTGAAGAGGAATTCATCTACAAATTCCAAAGATACATCTAAAAATGGGAACCCTGATCACATTGCTGCACAGACTTTCTCTTTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTGTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAGTATTAATCAGAAAGTTGTTGCAATTAAGCAACTAGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCCTGGCAAGAAACGACTTGACTGGAATACACGAATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATATCTGCATGACAAAGCTAATCCTCCTGTCATATACCGTGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGTTATCACCCGAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAGAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCCATTGATAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATAGAAGAAAATTTTCACAAATGGCTGATCCAATGCTACAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAGGCTAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCATACCTTGCTTTACACAGATATGATCCCAATACACAGACAGCTCAAAGCTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAGGAGAGGGCAGTGA 1143 0.4278 MGWIPCSGNSGTKKKIEKMEVQDSHVGQIKANPGKLKRNSSTNSKDTSKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQKVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALHRYDPNTQTAQSSRLAPGTPPRTRRGQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00009 380 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Gabi2670g00009 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Gabi2670g00009 380 ProSiteProfiles Protein kinase domain profile. 73 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00009 380 Gene3D Transferase(Phosphotransferase) domain 1 151 367 - -
Gabi2670g00009 380 PANTHER OS07G0668900 PROTEIN 23 360 - -
Gabi2670g00009 380 FunFam Serine/threonine-protein kinase PBS1 45 150 - -
Gabi2670g00009 380 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Gabi2670g00009 380 MobiDBLite consensus disorder prediction 361 380 - -
Gabi2670g00009 380 MobiDBLite consensus disorder prediction 34 54 - -
Gabi2670g00009 380 CDD STKc_IRAK 79 348 - -
Gabi2670g00009 380 MobiDBLite consensus disorder prediction 21 54 - -
Gabi2670g00009 380 SMART serkin_6 73 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2670g00009 380 Pfam Protein tyrosine and serine/threonine kinase 77 347 IPR001245 GO:0004672|GO:0006468
Gabi2670g00009 380 SUPERFAMILY Protein kinase-like (PK-like) 55 348 IPR011009 -
Gabi2670g00009 380 FunFam Serine/threonine-protein kinase PBS1 151 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00009 Gabi-Chr2670 64963 68627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00009 32 351 Glycoside Hydrolase AT3G07070 68.750 1.67e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2670g00009 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00009 - - gmx:100793549 719.924