Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00008 ATGGATATTAAGGAAGCAGAAAGGGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTACTTTCAGATCTTTCTCAGAGCTCCTAGCAGGTGCAATCAATGCCTCTCCCCCTATTGCATCTTCTCAAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCTGCAGGGAATCGCCCACCTTCTGGATTTGATTCTTCTCAGGCTGAGATTTTTGGAGCTGCACTTAGTAATTCTTCCGACAAGAGTCCTAATCTTGACACCAATCAGTCTCTCATATACAAGCCCATGGCAAAACTTGTATCAAAAACAACTGTTTCTCTTTTGGCAAATATGGGAAATTGCAGTACCAGTCAACAACAACCACGGCAATCAATGCAGGCCAATCTTCAACATCCAGACCATGAAAAATTTAGAATCTATATGAACTCAAATCTTCATCAGAGCCTTACCCCGCATGCAGAAACAAATCAAACTACTGAACCTTGTAAGATGGTACAGCAGAACCTAGAGGAGGATCAAAAAGCTTTGACATCCACAATTAATGGTGATCGACCTTCTTATGATGGATATAATTGGAGGAAATATGGGCAGAAGCAAGTAAAAGGAAGTGAGTACCCTCGAAGTTATTATAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAGGTAGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATTCAAAGCCACAGCTTCCTAAGCGTAACTCAGGAGGGACACAAGGATCAGGAATGATGTCTGATGGAATGGTTCAAGATATTTGGAGTAATAGTCACAGTGAGAGGAATGAATGCAATGAAGGTAGAATAGAGAACCAGAATAACACACGACTGTCTGAGAATTCAGCTTATGATGTCAAAGCTCCACAGGCTAATGCTTCTGTTCTAATTGGTGCAATCAATGCTGGTGGAGAAAGCCCAGAAAATTCATGTGGTCTAAGTGGGGAATGCGAGGAAGGAAGCAAGGGATTTGAGGCAGAGGAACATGAACACAAGAGTAAAAGAAGGAAAAATGAGAATAAATCCAATGAAGCAGCAGTGTCAGAGGAAGGTTTAGTGGAGCCTCGCATTGTGACACAAAGTTCTACAGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGACAAAAGGTGGTGAAAGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAATACAAAGTGTAACGTACGCAAACACGTGGAGAGAGCAATAGATGACCCAAGAGCATTTGTGACTACATATGAGGGAAAACACAACCATGAGATGCCACTAAAGAACACAGCAAGTGTGGCCTCTGAAAAAGATTCACAGGCTTCTCTCAGTAAAGATAAATCATGA 1416 0.4138 MDIKEAERVVVAKPVASRPTCSTFRSFSELLAGAINASPPIASSQTTVSAIRPKTVRFKPAGNRPPSGFDSSQAEIFGAALSNSSDKSPNLDTNQSLIYKPMAKLVSKTTVSLLANMGNCSTSQQQPRQSMQANLQHPDHEKFRIYMNSNLHQSLTPHAETNQTTEPCKMVQQNLEEDQKALTSTINGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQLPKRNSGGTQGSGMMSDGMVQDIWSNSHSERNECNEGRIENQNNTRLSENSAYDVKAPQANASVLIGAINAGGESPENSCGLSGECEEGSKGFEAEEHEHKSKRRKNENKSNEAAVSEEGLVEPRIVTQSSTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNTKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPLKNTASVASEKDSQASLSKDKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00008 471 MobiDBLite consensus disorder prediction 253 271 - -
Gabi2670g00008 471 ProSiteProfiles WRKY domain profile. 384 449 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 FunFam WRKY transcription factor 177 252 - -
Gabi2670g00008 471 MobiDBLite consensus disorder prediction 441 471 - -
Gabi2670g00008 471 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 MobiDBLite consensus disorder prediction 341 365 - -
Gabi2670g00008 471 Coils Coil 345 365 - -
Gabi2670g00008 471 Gene3D WRKY domain 177 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 Gene3D WRKY domain 375 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 MobiDBLite consensus disorder prediction 243 271 - -
Gabi2670g00008 471 FunFam WRKY transcription factor 57 375 449 - -
Gabi2670g00008 471 SUPERFAMILY WRKY DNA-binding domain 384 449 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 MobiDBLite consensus disorder prediction 326 372 - -
Gabi2670g00008 471 SMART WRKY_cls 389 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 465 IPR044810 GO:0003700
Gabi2670g00008 471 Pfam WRKY DNA -binding domain 391 447 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2670g00008 471 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00008 Gabi-Chr2670 56149 60915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2670g00008 92 450 WRKY Transcription Factor Family AT2G37260 44.855 2.87e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2670g00008 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00008 - - gmx:100794069 760.755