Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2670g00001 ATGCCACGTGTCGCACACTGCAACCCGCCATTCCTTTTTCTCTTTCTCTTTCTCTTTCTCTTTTTTATTCAGATGGATAGCAACGCTTCAAGTTCTCATTCAATGACAATTGCGCCCTCAAATCCCAGTAATGGATCTGGCAAGAAGGTGAGAAAACCTTATACAATTACCAAGTCTAGGGAGAATTGGTATGAGGAAGAGCACGACAAGTTCCTCGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAAACGGTTATTCAGATTCGAAGCCATGCCCAAAAATACTTCTTGAAGGTTCAAAAGCATGGGAATATAACACATGTGCCTCTTCCTCGTCCTAAGCAAAGCAAGCACTCGCTGTGCAGTTTGTATATGCGACCATTGGCCTTCGTAAGCACAGCCAGGAGAGTGTGTGCTAGAAATGCTGAAGAGCCGAAAACAATCTTCAGCTAA 480 0.425 MPRVAHCNPPFLFLFLFLFLFFIQMDSNASSSHSMTIAPSNPSNGSGKKVRKPYTITKSRENWYEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKHGNITHVPLPRPKQSKHSLCSLYMRPLAFVSTARRVCARNAEEPKTIFS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2670g00001 159 ProSiteProfiles SANT domain profile. 58 113 IPR017884 -
Gabi2670g00001 159 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Gabi2670g00001 159 MobiDBLite consensus disorder prediction 33 52 - -
Gabi2670g00001 159 Gene3D - 62 111 - -
Gabi2670g00001 159 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Gabi2670g00001 159 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Gabi2670g00001 159 PANTHER SWI/SNF COMPLEX-RELATED 30 126 - -
Gabi2670g00001 159 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Gabi2670g00001 159 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Gabi2670g00001 159 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Gabi2670g00001 159 CDD SANT 62 105 IPR001005 -
Gabi2670g00001 159 SMART sant 59 107 IPR001005 -
Gabi2670g00001 159 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2670g00001 Gabi-Chr2670 6558 7871 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi2670g00001 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2670g00001 - - gmx:778050 167.933