Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2669g00038 ATGGAATCATGTGTACCTCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAGATAAACTCACTAAAAATCGATCTAGATGTTATTGTTGAGATCGATCTCTACAGAATAGAACCATGGGATATACAAGATAAATGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGTCATAAAGATAAGAAGTATCCAACAGGGACAAGAACTAACAGAGCAACTGCTGCTGGATTTTGGAAAGCAACAGGAAGAGACAAAGCTGTGACATCCAAAAACAGAATAATAGGGATGAGGAAGACCCTTGTGTTCTATAAGGGACGTGCTCCAAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCAGAACATGGCCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTAGAAAACCTATTCCAAGTCAGAGGCCAGGTTATGAACCATGGTGTAATAGTCAACCACACTATTTCAGAGATCAAAGCTATGCAAATGCAAGACCCTTATCAATTTCAGATATTTTAAATGAAACTCATGAAGTGCTTCATTCTGCTGAAGGTACAAGTTTTAGTAACCCCTTTAGCTTGGAGCAGCAATTTCTATCCAACCAAACTGTTATGGATAAACAACTCATTGAGCTTCCACAACTTGATAGTCCAACAAGTTTGGCAATAAAAGAATGTAGCCAACAACATCATAATGTCCAAGATTGCAGTGATGAAAGGAGCAATAACAATGGACAAGGTATTGATTGGAAAAGCTTGGACAACTTGTTCGCTTCACAATTGACAGATACAAGTTACTTTTCAAATCCAAACTTGCCCATGAACATGATGATACCTCATAGCCATGAACTACAACCTCAAAATCAAGCTAGTCATATCCTAGGATGCTTTCCTGATTCATAA 957 0.3887 MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYRIEPWDIQDKCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVTSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPIPSQRPGYEPWCNSQPHYFRDQSYANARPLSISDILNETHEVLHSAEGTSFSNPFSLEQQFLSNQTVMDKQLIELPQLDSPTSLAIKECSQQHHNVQDCSDERSNNNGQGIDWKSLDNLFASQLTDTSYFSNPNLPMNMMIPHSHELQPQNQASHILGCFPDS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2669g00038 318 FunFam NAC domain-containing protein 14 157 - -
Gabi2669g00038 318 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Gabi2669g00038 318 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 246 - -
Gabi2669g00038 318 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Gabi2669g00038 318 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
Gabi2669g00038 318 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2669g00038 Gabi-Chr2669 272385 274503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2669g00038 1 318 NAC Transcription Factor Family AT1G71930 55.723 4.15e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2669g00038 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2669g00038 - - var:108325420 522.316