Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2669g00027 ATGCCAACACCAACACCAACACCTGCAGCAGCGTTTGGTGGTGTAGAAACTCCAAATGGAAACTCATCCCACGCTCATGCACCTCCCAAACACACCCCTCAAGAATCGCGTGACCTCGCTCCTTTCTTGTCTTGCTCTTACCCAATCACGCTTAAGTTCATGGAAGTGGGATACCGATTGAAGATAGAGAACAAACAAGGCAGAGGAGGGTGTATCAATAGATTGTTTTCGACGCACGAATCATCACCGTCTGATCAAAGATCAACGGTGGAAGCGCCGAAAGAGCGAACCATTTTGAACGGCGTAACAGGGATAGCGTACCCAGGGGAAATCCTAGCCATCCTGGGCCCATCTGGGAGCGGAAAATCCACGCTCCTAAACGCGCTTGCAGGGAGGCTCCATGGAAACGGCCTCACCGGAACAATCCTCGCCAACTCCTCCAAACTCAACAAACTGGTTCTCCGTCGAACCGGGTTCGTGACACAGGACGACGTCCTCTACCCTCACCTAACGGTTCGCGAGACTCTCGTCTTCTGCTCCATGCTTCGCCTCCCGAGGACGCTGCCGCGCGCGGCAAAGATCGCGGCGGCGGAGTCGGCGATAGCGGAGCTTGGGCTAGGGAAGTGCGAGGACACTATCATCGGTAACACCTTCATCCGCGGCGTGTCCGGCGGGGAACGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGATCCGGCGCTGCTTATTTTAGACGAGCCTACCTCCGGTCTTGACTCCACGGCGGCGCACCGCCTGGTGGTGACGCTGGGGTCGCTGGCGAAGAAAGGGAAGACGGTGGTTACGTCGTTGCACCAACCATCGAGCCGCGTGTACCAGATGTTCGACAAAGTGCTCGTGCTGTCGGAAGGACAGTGCTTATACTTCGGCAAAGGAAACGACGCCATGCGCTACTTCGAGTCGGTTGGGTTCGCGCCGTCTTTTCCGGTAAACCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTTGATGGTCTAAGTGAAAGAGATAGGCCAGCCATAAAGCAAAACCTAGTTCATTCATACAACACAGTACTTGCTCCCAAGGTAAAAGCTTCCTGCATGGACACTGTCAGTTTTCCTACAAGGAACACTCACCTTTTGAGAAGCAACTCTTCCAAAGAACGTAGATATACTGACAGGGTTAACTTCTTAGATTGGTTCAACCAATTCAGTATTCTGCTCCAGAGAAGCCTCAAAGAAAGAAAGCATGAATCCTTTAACACTCTGAGAGTCTTTCAAGTTATTGCTGCTGCACTATTAGCTGGTCTAATGTGGTGGCACTCAGACTATAGGAATATTCAAGATAGGCTTGGCCTACTCTTCTTCATTTCCATCTTTTGGGGAGTCTTCCCGTCTTTCAACTCTGTCTTTGCATTCCCTCAAGAACGTGCCATCTTTATGAAAGAGAGAGCTTCTGGTATGTATACACTGTCGTCCTATTTTATGGCTCGAATTGTTGGAGACCTGCCCATGGAGCTTATCCTTCCCACAGTTTTCCTCATTGTTACATATTGGATGGGTGGATTAAAGCCTGATTTGTGGGCTTTTCTCTTGACTTTGTTGGTTGTTCTTGGATACGTGCTTGTGTCACAGGGTCTTGGCCTTGCTTTAGGTGCAGCAATAATGGATGCAAAACAAGCTTCCACAGTTGCAGCTGTGACAATGCTAGCATTTGTCTTAACAGGTGGATACTATGTCCATAAGGTGCCATCTTGTATGGCTTGGATCAAATATATATCCACAACCTTTTACAGTTATAGATTGCTGACTAGAATCCAGTATGGGGATGGAAAGAAAATATCATATCTGTTGGGTTGCTATCATGGTGATAGTGATAGGGCTAGCTGCAAGTTTGTTGAAGAAGATGTGGTGGGGCAAATCGGCACTGTGGGAAGCATTGGGGTGTTATTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCCTTGATGCGCATCAAGAGTTGA 2025 0.4948 MPTPTPTPAAAFGGVETPNGNSSHAHAPPKHTPQESRDLAPFLSCSYPITLKFMEVGYRLKIENKQGRGGCINRLFSTHESSPSDQRSTVEAPKERTILNGVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGNGLTGTILANSSKLNKLVLRRTGFVTQDDVLYPHLTVRETLVFCSMLRLPRTLPRAAKIAAAESAIAELGLGKCEDTIIGNTFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLVVTLGSLAKKGKTVVTSLHQPSSRVYQMFDKVLVLSEGQCLYFGKGNDAMRYFESVGFAPSFPVNPADFLLDLANGVCHVDGLSERDRPAIKQNLVHSYNTVLAPKVKASCMDTVSFPTRNTHLLRSNSSKERRYTDRVNFLDWFNQFSILLQRSLKERKHESFNTLRVFQVIAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLIVTYWMGGLKPDLWAFLLTLLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYSYRLLTRIQYGDGKKISYLLGCYHGDSDRASCKFVEEDVVGQIGTVGSIGVLFFMFVFYRLLAYLALMRIKS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2669g00027 674 Gene3D - 87 316 IPR027417 -
Gabi2669g00027 674 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2669g00027 674 FunFam ABC transporter G family member 22 86 316 - -
Gabi2669g00027 674 SMART AAA_5 108 299 IPR003593 GO:0016887
Gabi2669g00027 674 Pfam ABC transporter 100 250 IPR003439 GO:0005524
Gabi2669g00027 674 Pfam ABC-2 type transporter 279 345 IPR043926 GO:0140359
Gabi2669g00027 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 84 322 IPR003439 GO:0005524
Gabi2669g00027 674 Pfam ABC-2 type transporter 407 611 IPR013525 GO:0016020|GO:0140359
Gabi2669g00027 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 666 - -
Gabi2669g00027 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2669g00027 Gabi-Chr2669 177491 184053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2669g00027 98 358 Calmodulin-binding Proteins AT2G36910 28.679 5.74e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2669g00027 K05681 - gmx:100812367 1143.64