Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2668g00039 ATGCCTCGTGGAACGCTTGAAGTTATTCTTGTTAGCGCAAAAGGGCTTCATGACAGTGATTTTTTCAAGAAAATGGATCCTTATGTGATCCTCACTTATAGGGCACAAGAACACAGAAGCAGTGTTGCTCAAGGTGCAGGATCTAATCCCAGTTGGAATGAAAGCTTCCTTTTTACAGTTTCTGACAATGTTTCTGAGCTTAATCTGAGGCTAATGGACAAAGATACGTTTACCAAGGATGATTTCCTTGGTGAGACAAAAATTAATTTGGAACCAGTGTTTACTGAGGGTAGCATTCCAGAAACTGTTTACAATGTTGTGAGGAATCAGAAATACAGTGGGGAAGTTAAAGTGGCTCTCACTTTTCATCCTGAGGTAAAAGCACAACAGTTGGCAGTGAACTCAGCAAGGGTGAAGAGGAAAGCAAAATTGGTGGATGGAGAGAATCAGTCATAG 456 0.4101 MPRGTLEVILVSAKGLHDSDFFKKMDPYVILTYRAQEHRSSVAQGAGSNPSWNESFLFTVSDNVSELNLRLMDKDTFTKDDFLGETKINLEPVFTEGSIPETVYNVVRNQKYSGEVKVALTFHPEVKAQQLAVNSARVKRKAKLVDGENQS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2668g00039 151 SMART C2_3c 5 102 IPR000008 -
Gabi2668g00039 151 Gene3D C2 domain 2 125 IPR035892 -
Gabi2668g00039 151 PANTHER C2 DOMAIN-CONTAINING 1 129 - -
Gabi2668g00039 151 Pfam C2 domain 4 99 IPR000008 -
Gabi2668g00039 151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Gabi2668g00039 151 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2668g00039 Gabi-Chr2668 360986 362390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2668g00039 4 95 C2H2 Transcription Factor Family AT4G21160 34.783 5.25e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2668g00039 - - gmx:100814819 209.149