Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2666g00018 ATGGCCTTTGAGGAGTCTGAGTTTGTGATTCCTGAGCTTGAAAGAGAGGAAAACTTGATTGCTGCAGCAAGACACATTGTGAGGGCATTAGAGTCAAAGAAGAGTCTCACTAGTGATGCCAAGAAAATTTTGGCAGAACTTGGCACCCAATTGTCTTCTATCTCCAAAATCAATGAGAAGGAGGAGGGGGGGATTAGTGCTTTTGAAGATAGGCTTGATGCCATTCAGGAGATAATAATGAGATGGGAGGAACATCAGTGTATGATTTGGGATTGTGGACCAGATGAAGTATCTGGGTATCTGAATGCAGCTGAAGAAGTTCATGGATTGATAGAGAAGTTGGAGAGCTTGCATTTGAGCAAAGAGGACCAAGAGTACAAGTTTTTGAATAGGGCTTATAGTGTTCTTCAAACAGCTATGGCAAGGCTTGAAGAAGAGTTCAGGAACTTGCTTATCCAGAATAGGCAACCTTTTGAGCCTGAATACGTGTCTTTCAGATCAAATGAAGAGGATATTGCTGATGAGAGCTCTGTGGTATCTTTAGGTGATGACTCAGTTGAGGAATCATTCAGAAGAGACAGTGTTAGCAAAGCCTCAGAGGAGCATATCCTTGATTTAGTTCATCCAAATGTGATCCCACATCTCAGGTGTATCTCAAACTTAATGTTTGCTTGTAATTATGACCAGGAATGTTCCCATGCTTATACCATTGCCAGAAGGGATGCCTTAGATGAGTGTTTCTTCATTCTTGAAATGGAAAGGGTGAGTATTGAAAATGTCATGAGAATGGAGTGGGGTACTTTAAATTCCAAAATCAAAAGGTGGATTTGGGCTGTGAAAATCTTTGTCACAGTGTATCTTGCTAGTGAGAGGTGGCTCAGTGACCAGATTTTTGGGGAAGGGGAACATGTTAGTCTAGTTTGTTTTGTTGATGCATCAAAGGCTTCAATATTGCAGCTTCTGAATTTTGGTGAAGCCATGTCCATTGGTCCTCACCAACCTGAAAAATTGTTTAAAATTCTTGACATGTATGAGGTTCTGGCAAGCCTTATGCCAGACATTGATGCTTTGTATTCAGGTGAGGTCGGTTCTTCTGTTAGGCTCGAATGTCATGAGATTCTAAAGAGATTAGGCGAATGTGTGAGAGCAACATTTCTTGAATTTGAAAATGCCATTGCATCAAATGCATCATCAACCCCTTTTATAGGTGGTGGGATTCATCCTTTGACCAGGTATGTCATGAACTATGTTACAACTCTCACTGATTATAGCCAAACACTTAATTTGCTTCTGAAGGATCAAGAAGAACATGATGCTATTTTGGTGTCACCTGACATGAGCCCTGGTACAGAAGAAGACAACAAAAGCCAGGGATCTCTAGGTAGAGTTTCCTCAATGACCCTCCACTTCAGATCAGTGGCTTCAATCTTGGAGTGCAACCTTGAAGACAAGTCCAAGTTGTACAAAGAAGCATCATTGCAACACTTGTTCTTAATGAATAATTTATGTTACATGGCTCAAAAGGTTAAAGGGTGTGAACTTAGGTTGATATATGGAGATGAATGGATTAGAAAGTGCAAATGGAAGTTTAGGCAGCATGCAATCAATTATGAAAGAACTAGTTTGAGTTCCATTCTGTCCTTGCTCAAGGATGAGGGAATTCAAATTCCAGGTACAAATTCTGTCTCAAAAAGTCTTCTTAAGGAGAGGTTAAAAAGCTTCTACCTTGCCTTTGAGGATCTTTATAGGATCCAAACATCTTGGTTTGTCCCAGATGTTCAGCTTCGTGAAGAATTGAGGATTTCTCTATCCCTGAAAGTAATCCAAGCTTATAGGACATTTGTTGGTAGGCATAATAGTTATATAAGTGACAAACACATCAAATACAATTCTGATGATTTAGAAAATTATCTTATGGATTTCTTTGTAGGAACTCCAAAATCATTGCAAAATAGCCATAGGGGGTGA 1968 0.3979 MAFEESEFVIPELEREENLIAAARHIVRALESKKSLTSDAKKILAELGTQLSSISKINEKEEGGISAFEDRLDAIQEIIMRWEEHQCMIWDCGPDEVSGYLNAAEEVHGLIEKLESLHLSKEDQEYKFLNRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSNEEDIADESSVVSLGDDSVEESFRRDSVSKASEEHILDLVHPNVIPHLRCISNLMFACNYDQECSHAYTIARRDALDECFFILEMERVSIENVMRMEWGTLNSKIKRWIWAVKIFVTVYLASERWLSDQIFGEGEHVSLVCFVDASKASILQLLNFGEAMSIGPHQPEKLFKILDMYEVLASLMPDIDALYSGEVGSSVRLECHEILKRLGECVRATFLEFENAIASNASSTPFIGGGIHPLTRYVMNYVTTLTDYSQTLNLLLKDQEEHDAILVSPDMSPGTEEDNKSQGSLGRVSSMTLHFRSVASILECNLEDKSKLYKEASLQHLFLMNNLCYMAQKVKGCELRLIYGDEWIRKCKWKFRQHAINYERTSLSSILSLLKDEGIQIPGTNSVSKSLLKERLKSFYLAFEDLYRIQTSWFVPDVQLREELRISLSLKVIQAYRTFVGRHNSYISDKHIKYNSDDLENYLMDFFVGTPKSLQNSHRG 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2666g00018 655 Pfam Exo70 exocyst complex subunit 273 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi2666g00018 655 SUPERFAMILY Cullin repeat-like 74 642 IPR016159 -
Gabi2666g00018 655 Coils Coil 13 33 - -
Gabi2666g00018 655 Gene3D Exocyst complex component Exo70 81 651 - -
Gabi2666g00018 655 Coils Coil 126 153 - -
Gabi2666g00018 655 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 643 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2666g00018 Gabi-Chr2666 189505 192048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2666g00018 12 654 EXO70 exocyst subunit family AT3G29400 46.061 0.0 563