Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2666g00014 ATGTTTCGTTCTTCTCCATCTTATCCTTTTTCCTTTACTCGATTCTACTTCCTCTTCTGCGTACTCCTTCTCCTCTTCGCATCTCGAAACGACGCCGTTTCGTCCGATTCGGACAAATCAGTGCTCCTTCGCCTGAAAAGCTCACTCTCCGACCCCTCCGGTCTGCTATCCACGTGGAATGCCGGCGCCGGCGGTGATTCCGACCACTGTTTCTGGTTCGGCGTCCTCTGCGACTCGAGCTCGCGCGTCGTCGCGCTCAACATCACCGGAAACGGCGCCGCCGCTGCCGGCGGAGGTAAACGAAACTCTCACCCGTGCTCCGATTTTGCTCAGTTTCCGCTTTATGGGTTTGGAATTAGGAGGAGCTGTGAGGGTAGTAATGGTTCTTTGTTTGGGAAGGTTTCGCCTTTGATCAGTGAGCTTTCTGAGCTTAGGGTTCTTTCCCTTCCCTTCAATGGGTTGGAGGGTGAAGTTCCTGATGAAATTTGGCGTATGGAAAACTTAGAGGTTATTGATCTAGAGGGGAATTTGATAACCGGGTATCTTCCTTTTCGGGTTAGTGGTTTGAGGAATTTGCGGGTTCTGAATCTCGGGTTCAATAGGATTGTTGGGGAGATACCAAGTTCAATTTTTGCATCTCTTGAGAGTTTGGAGGTTTTGAATTTAGCTGCCAATGAATTGAATGGTTCTGTTCCTGGTTTTGTTGGAAAGCTGAGGGGGGTGTATTTGTTGTTTAATCAGCTTGGAGGGGTTATCCCACCAGAGATTGGGGACAATTGTGGGAAACTTGAGCATTTGGATTTATCTGGTAATTTATTAGTTCAAGGGATTCCGGCGAGTTTGGGTAATTGTAGTCGGTTGCGGACGCTTTTGCTGTATTCTAATCTGTTGGAAGATGTTGTTCCGGCTGAATTTGGCAATCTTAAGAACCTTGAGGTGTTGGATGTTTCGAGGAACACTCTCAGTGGTTCTGTGCCCCGAGAGCTTGGGAATTGTACGGAGTTGTCTGTTCTTGTGCTGTCGAATCTTTTCAATCCACTCGGAGATGGAGATGTTGCTGGTGCTTCGGTGGGGAAACTGATTTCTGTAAATGATGAGTTGAACTATTTTGAAGGTGCAATGCCTGCAGAAATTATGGCGCTTCCAAAGCTGAGAATATTGTGGGCTCCTATGGTAAACCTGGAAGGCAGTTTTCCAGGCAGTTGGGGTGGTTGTGATAACTTGGAGATGATCAATTTGGCTCAAAATTTTTTCAGTGGGGAGTTTCCAAACCAGCTGAGTATTTGCAAGAAGCTGCATTTTCTTGATTTAAGCTCAAACAACCTTACTGGCGAGCTTTCTGAAGAACTTCATGTTCCCTGTATGACTCTGTTTGATGTTAGTGGGAACATCTTATCTGGTTCAATTCCTGATTTCTCCAATAGTAACGTTTGTCTCCCTGTTACTTTATGGAATGGAAATTTGTTTGATGCTGACAACATGTCCCCTCCATATGCATCCTTTTTTTCATCAAAGGTTCGTGAGAGAACCCTTTTACCATCACTGAGGGGAGTTGGTCTTTCAGCTTTTCACAACTTTGGGCAAAACAACTTTACTGGCATTCAGTCATTGCCAATAGCACGTGACAGGCTCGGGAAGGCAACTGATTACGCTTTTCTTGTTGGAGAAAACAATCTTACGGGACCATTTCCTACGTATCTATTTGAGAAATGTGATGGATTAGATGCATTGCTTTTAAATGTCAGTTATAATAGGTTATCTGGTCAGATTCCTTCCGATTTTGGTGGAATGTGCAGATCATTAAAATTTCTGGATGCATCTGGAAATCTGTTTGCAGGACCAATTCCCCTTGCCTTCGGGAATTCGGTCTCTCTTGTTGCTCTGAACCTCAGTAGGAATCAGTTACAAGGTCAGATTCCCACCAGCCTTGGGCAGATGAAGGATCTGAAGCTTCTTTCTTTGGCTGGTAATGAGTTAAATGGCTCAATTCCTACCAGCCTGGGGCAGTTGCACTCTTTAGAAGTCTTGGATCTTTCTTCGAACTTCCTTACTGGTGAGATTCCAAAGGATATTGAGAACATGAGAAATCTGACCGATGTTTTACTCAATAACAACCTCCTTTCTGGACCTGTTCCTGCTGGTTTGGCAAATGTCAGTACGCTCTCAGCATTTAATGTGTCTTTCAATAACTTATCTGGATCCTTGCCATCACATAGTAACTTGATTAAATGCAGCAGTGCTGTTGGGAATCCATATCTAAGTTCCTGCCGCGGGTTATCTCTAACTGTGCCAACAGCCAATCAACCAGGGCAGGTTGTTGATGGTTCTAATATTGTTGCACCACCACAAGCTACTGACCAAAAGAGTGGGAATAGCTTCAGTTCTATTGAAATAGCATCTATAACTTCTGCTTCGGCCATTGTTTCTGTTCTTATTGCCCTGATTGTTCTATTCTTTTACACACGGAAGTGGAATCCAAAGTCCAGGGTTGTTGGTTCTGCGAGAAAAGAAGTTGAATTGTTTGCTGATATTGGGGTCCAAATAACATTTGAAAGTGTTGTCCATGCCACGGGAAATTTCAATGCAAGCAACTGTATTGGGAATGGAGGATTTGGGGCAACCTATAAGGCAGAGATATCGCCAGGAAACTTAGTGGCAGTCAAACGTCTGGCAGTAGGACGTTTCCAAGGTGTTCAACAATTCAATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTTGTCACTCTGATTGGTTTTCATGCTTCTGAGACAGAGATGTTTCTTGTATACAATTATTTGCCAGGTGGTAATCTGGAGAAGTTCATCCAGGAGAGATCCACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATAGCCCGTGCACTGGCCTATCTGCATGATCAGTGTGTACCTCGTGTTCTTCATCGCGATGTCAAGCCCAGCAATATCTTGCTGGATGATGATTTTAATGCTTATCTATCTGACTTTGGATTGGCTAGACTTCTGGGAACTTCGGAGACCCATGCTACCACTGGTGTGGCAGGAACATTTGGATATGTTGCTCCTGAATATGCCATGACTTGTCGTGTTTCTGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTAGAGTTGCTCTCAGACAAGAAGGCATTGGACCCTTCATTTTCTTCTTATGGGAATGGTTTCAACATAGTTGCATGGGCATGGATGCTACTGAGACAAGGCAGGGCAAAGGAGTTCTTCACTGCTGGGTTATGGGATGCAGGACCAGGAGATGATTTGGTAGAGGTGCTACGCTTAGCAGTTGTGTGTACTGTTGATTCTCTCTCTACCAGACCTACAATGAAACATGTTGTAAGAAGGCTTAAGCAACTTCAACCCCCATCATGCTAG 3420 0.4468 MFRSSPSYPFSFTRFYFLFCVLLLLFASRNDAVSSDSDKSVLLRLKSSLSDPSGLLSTWNAGAGGDSDHCFWFGVLCDSSSRVVALNITGNGAAAAGGGKRNSHPCSDFAQFPLYGFGIRRSCEGSNGSLFGKVSPLISELSELRVLSLPFNGLEGEVPDEIWRMENLEVIDLEGNLITGYLPFRVSGLRNLRVLNLGFNRIVGEIPSSIFASLESLEVLNLAANELNGSVPGFVGKLRGVYLLFNQLGGVIPPEIGDNCGKLEHLDLSGNLLVQGIPASLGNCSRLRTLLLYSNLLEDVVPAEFGNLKNLEVLDVSRNTLSGSVPRELGNCTELSVLVLSNLFNPLGDGDVAGASVGKLISVNDELNYFEGAMPAEIMALPKLRILWAPMVNLEGSFPGSWGGCDNLEMINLAQNFFSGEFPNQLSICKKLHFLDLSSNNLTGELSEELHVPCMTLFDVSGNILSGSIPDFSNSNVCLPVTLWNGNLFDADNMSPPYASFFSSKVRERTLLPSLRGVGLSAFHNFGQNNFTGIQSLPIARDRLGKATDYAFLVGENNLTGPFPTYLFEKCDGLDALLLNVSYNRLSGQIPSDFGGMCRSLKFLDASGNLFAGPIPLAFGNSVSLVALNLSRNQLQGQIPTSLGQMKDLKLLSLAGNELNGSIPTSLGQLHSLEVLDLSSNFLTGEIPKDIENMRNLTDVLLNNNLLSGPVPAGLANVSTLSAFNVSFNNLSGSLPSHSNLIKCSSAVGNPYLSSCRGLSLTVPTANQPGQVVDGSNIVAPPQATDQKSGNSFSSIEIASITSASAIVSVLIALIVLFFYTRKWNPKSRVVGSARKEVELFADIGVQITFESVVHATGNFNASNCIGNGGFGATYKAEISPGNLVAVKRLAVGRFQGVQQFNAEIKTLGRLHHPNLVTLIGFHASETEMFLVYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWAWMLLRQGRAKEFFTAGLWDAGPGDDLVEVLRLAVVCTVDSLSTRPTMKHVVRRLKQLQPPSC 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2666g00014 1139 SMART LRR_sd22_2 141 170 - -
Gabi2666g00014 1139 SMART LRR_sd22_2 189 219 - -
Gabi2666g00014 1139 SMART LRR_sd22_2 308 334 - -
Gabi2666g00014 1139 SMART LRR_sd22_2 670 696 - -
Gabi2666g00014 1139 SMART LRR_sd22_2 260 279 - -
Gabi2666g00014 1139 SMART LRR_sd22_2 429 452 - -
Gabi2666g00014 1139 Gene3D Transferase(Phosphotransferase) domain 1 936 1136 - -
Gabi2666g00014 1139 Gene3D Phosphorylase Kinase; domain 1 823 935 - -
Gabi2666g00014 1139 PRINTS Leucine-rich repeat signature 432 445 - -
Gabi2666g00014 1139 PRINTS Leucine-rich repeat signature 670 683 - -
Gabi2666g00014 1139 Pfam Leucine rich repeat 285 342 IPR001611 GO:0005515
Gabi2666g00014 1139 Pfam Leucine rich repeat 624 681 IPR001611 GO:0005515
Gabi2666g00014 1139 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 824 935 - -
Gabi2666g00014 1139 Gene3D Ribonuclease Inhibitor 347 484 IPR032675 -
Gabi2666g00014 1139 Gene3D Ribonuclease Inhibitor 500 768 IPR032675 -
Gabi2666g00014 1139 Gene3D Ribonuclease Inhibitor 241 346 IPR032675 -
Gabi2666g00014 1139 ProSiteProfiles Protein kinase domain profile. 860 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2666g00014 1139 SUPERFAMILY L domain-like 129 274 - -
Gabi2666g00014 1139 Pfam Protein kinase domain 863 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2666g00014 1139 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 936 1138 - -
Gabi2666g00014 1139 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 519 761 - -
Gabi2666g00014 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 355 446 - -
Gabi2666g00014 1139 SMART LRR_typ_2 285 307 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 141 165 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 260 284 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 189 213 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 308 332 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 214 236 IPR003591 -
Gabi2666g00014 1139 SMART LRR_typ_2 670 694 IPR003591 -
Gabi2666g00014 1139 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 19 490 - -
Gabi2666g00014 1139 SMART serkin_6 860 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2666g00014 1139 CDD STKc_IRAK 866 1134 - -
Gabi2666g00014 1139 Gene3D Ribonuclease Inhibitor 34 240 IPR032675 -
Gabi2666g00014 1139 SUPERFAMILY L domain-like 237 738 - -
Gabi2666g00014 1139 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 238 348 - -
Gabi2666g00014 1139 Pfam Leucine Rich Repeat 262 284 IPR001611 GO:0005515
Gabi2666g00014 1139 ProSitePatterns Protein kinases ATP-binding region signature. 866 888 IPR017441 GO:0005524
Gabi2666g00014 1139 SUPERFAMILY Protein kinase-like (PK-like) 846 1131 IPR011009 -
Gabi2666g00014 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 980 992 IPR008271 GO:0004672|GO:0006468
Gabi2666g00014 1139 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2666g00014 Gabi-Chr2666 169243 173121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2666g00014 18 1139 Receptor kinase-like Gene Family AT3G02130 64.454 0.0 1353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Gabi2666g00014 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2666g00014 - - gmx:100819882 1714.89