Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2666g00012 ATGGCACATTCAACATCTCTGAAAGTTCATCAAGTTTGTTCTGTGGCACCACCACAAGAAACAACCCCAATCTCTCTGCCCTTAACCTTCTATGATGTCCTATGGATAAGACTCCCTCCTGTTGAACGTCTTTTCTTCTATGAGTTCCACAACCAAACAACAACAACAACAACTACTACTTCATTCTTTGATTCTATTCTTCCCAATCTCAAACAGAGTCTTTCACTCACACTCCAACACTTCCTTCCTCTTGTTGGCAACATCACATGGCCAAATGATTCACTCAACCCCATCATCAAGTATGTCCCTGGTGATGCTGTCCCTTTCACTATAGCTGAATCCAACGCTGATTTCAACCATTTATGTTCAAATTTCTGTGATGTTGTTGAACGCCACCCCTTAATCCCTCGCTTGAAAATTTCACATGATCAAGCATCTGTGTTAGCCTTGCAAGTCACTGTTTTCCCAAGCTTTGGTTTTTGTATTGGGATAACCACACACCATGCAGCACTTGATGGAAAGTCTTCAACTTTGTTTTTGAAATCATGGGCCCATCTTTGTTCTAACCTCGGAGGATCATCATTACCTGAAAATCTGACACCTTTCTTTGATAGGTCAGTGATAAGAGACCCTTCAGGGATCAATGATGCTTATGTCAACGGGTGGTTGACTTATGGTGGAGAAACAAATAATCGAAGTTTGAAGGTGTGGGAATCTATTAACACAGCACAAACAGATGCAGTTAAAGGTTTGTTTGAGTTAACCCCTTCACATATCCAAAAGCTTAAGCAATATGCACTATCTAAGCTGAAAATGAAGGTTAAGTTATCATCATTTTCGGTTACTTGTGCGTATTTATTGGGGTGTGTAGTCAAAGTAGACCAACCAAAATCCAACAGGGTAGCTTTTATTTTCTCTGTGGATTGTAGATCTCGCTTGGACCCTCCAATTGTGCCAACATATATTGGAAATTGTGTTATACCCCACGCTGTTGTGGTGGAGACAGAGGAGGTATTAGGAAATGATGGATTCATAAGTGCTCTTAAGGGGATAATTGATGAGTTGAATAGGGTGGAGAATGATGGGGTGCTACATGATGCAAAAAATTGGATGCAAAAGATACAATCTGTATCAGGGGATAGATTATTCTCTACTGCAGGGTCTCCTCGGTTTGAGGTTTATAGTATTGATTTTGGATTTGGAAGGCCTAAAAAGGTTGATGTTGCTTCAATAGACAAAACAGGAGCATTTTCTCTTTCTGAAAGTAAGAATAACAATGGAGGAATTGAGATTGGTTTGGCATTGAACAAGGGTCAAATGGAAGCTTTTGCTGCTCTTTTTTCTCAAGGACTTGAATCCTTGTAA 1365 0.4007 MAHSTSLKVHQVCSVAPPQETTPISLPLTFYDVLWIRLPPVERLFFYEFHNQTTTTTTTTSFFDSILPNLKQSLSLTLQHFLPLVGNITWPNDSLNPIIKYVPGDAVPFTIAESNADFNHLCSNFCDVVERHPLIPRLKISHDQASVLALQVTVFPSFGFCIGITTHHAALDGKSSTLFLKSWAHLCSNLGGSSLPENLTPFFDRSVIRDPSGINDAYVNGWLTYGGETNNRSLKVWESINTAQTDAVKGLFELTPSHIQKLKQYALSKLKMKVKLSSFSVTCAYLLGCVVKVDQPKSNRVAFIFSVDCRSRLDPPIVPTYIGNCVIPHAVVVETEEVLGNDGFISALKGIIDELNRVENDGVLHDAKNWMQKIQSVSGDRLFSTAGSPRFEVYSIDFGFGRPKKVDVASIDKTGAFSLSESKNNNGGIEIGLALNKGQMEAFAALFSQGLESL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2666g00012 454 Pfam Transferase family 14 445 - -
Gabi2666g00012 454 Gene3D - 7 234 IPR023213 -
Gabi2666g00012 454 PANTHER - 7 453 - -
Gabi2666g00012 454 SUPERFAMILY CoA-dependent acyltransferases 252 453 - -
Gabi2666g00012 454 Gene3D - 244 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2666g00012 Gabi-Chr2666 147397 148761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2666g00012 57 443 Monolignol Biosynthesis Gene Families AT5G48930 25.436 1.05e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2666g00012 - K13264 gmx:100127365 569.696