Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2666g00009 ATGATTAATAGTCCAAAAGAAGCAGAATTTCCTTTGAAACTGGAAGGTCTTTCAAGTGAACATCATGAAAAAGCAAAGGCTTCATCATCAAGTTCATCACAATGGCTAAAACTGAAGGATCCAAGGATAGTGCGTGTATCAAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTATGCACAATAAGAGGACTAAGAGATAGGAGGGTAAGGCTTTCTGTTCCCACAGCCATTCACCTTTATGATCTTCAAGATAGGCTAGGGCTCAATCAACCAAGCAAAGTTGTTGATTGGTTACTTAATGCAGCTAAGCATGAAATTGATGAACTACCACCTTTGCCAATACCTCCAGGGAACTTCACTTTCGGTTATCCATCTTTTGGTACTAATTCTAATGAAGTTAGCACCACCCCAAGTGAAGGTTCATGCCAAAATACTATCTGGAAGTCAAAACCTAAAGAAGTTTCAAGAGAAATGGTTACTGATAAACAAAGTTGGATAAGAAGAAATGAAGAGGATGATAAACAAGGAAGCAATAATGATTGTCTTGGTTCACATGTTATGCCAAATAATTATCTTTTACCAAAAGCAAATCATCCTTCTTTCTTAGGCTTGTTCAACACTATGCCACTTGGTTACCATTGGGAGCCTAACTCAGCTGAAGTTCCTCATTTGGCAAACCATGGATTTGTAAACCAAACAGATATACACAACATTAATGGTGTGCCTTTCCCATCAACATTGTCTTTATCAACTGGGAGTACTTCTCAGATATACACAGCAACACAGTCATATTTTCCTTCACAGGTTGCAGCAATTGAGATGGATCCAAGACAAATTAATCACTATCAGATGCTGAGTTCAAGTTCTCAAAATCTCTTGACTAATTCTCTCAATCCATCTCAACATCTCATGAATCAATCAGGGAAACACTTCAACTTGGGTAGGATGATGACTCCTAAACTTTTCCATTCACCAAACAGCAGTGAAAGCCATTCCCATAAAGATCAGGATTTTCCTTCCAAGTGA 1029 0.3858 MINSPKEAEFPLKLEGLSSEHHEKAKASSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTFGYPSFGTNSNEVSTTPSEGSCQNTIWKSKPKEVSREMVTDKQSWIRRNEEDDKQGSNNDCLGSHVMPNNYLLPKANHPSFLGLFNTMPLGYHWEPNSAEVPHLANHGFVNQTDIHNINGVPFPSTLSLSTGSTSQIYTATQSYFPSQVAAIEMDPRQINHYQMLSSSSQNLLTNSLNPSQHLMNQSGKHFNLGRMMTPKLFHSPNSSESHSHKDQDFPSK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2666g00009 342 MobiDBLite consensus disorder prediction 13 27 - -
Gabi2666g00009 342 MobiDBLite consensus disorder prediction 1 33 - -
Gabi2666g00009 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 333 IPR005333 GO:0003700
Gabi2666g00009 342 MobiDBLite consensus disorder prediction 328 342 - -
Gabi2666g00009 342 Pfam TCP family transcription factor 52 164 IPR017887 -
Gabi2666g00009 342 MobiDBLite consensus disorder prediction 319 342 - -
Gabi2666g00009 342 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2666g00009 Gabi-Chr2666 127381 129964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2666g00009 35 285 TCP Transcription Factor Family AT3G02150 45.000 1.03e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2666g00009 TCP 4.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2666g00009 - - aprc:113867214 464.536