Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2665g00022 ATGGCGAGTCGGCTGAAGGAAGATGAGAAGAACGAACGCGTGATTCGAGGTCTTCTCAAGCTTGAACCGAATCGCAGATGCATAAACTGCAACAGTCTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAACTGTAGTGGAATACACCGGGAATTTACGCATCGAGTAAAATCAGTTTCAATGTCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTCAGTCTTTCCCTGATAGCAGTAATGTTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGAGAGAGGACCTCTGACAAACCACCAAGAACAAAGGCTGGTGACAAAGATGATTTCTATGAAAACAGGAAATCTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATATGAGGACACATATGAACGCCGTTATAGTGGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAAGTCCTGGTCGTCCTCCAATAATCAATGATTGGCGTCGTGAAGACCGAAGAGTGGAAAGCCAATCTCCTGAACGAGCCAAAGATCTGGGTTCTTCAAGCCCACCTGTGGTTCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTACCTCTTCGGATAAGTGAACCCCCCAAACCGAACAGTGGAAGGGCTGCTGATGGCTCAGCACTGACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAATGGGAACCCTGTAGATGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTCGATGCTGATCCTGAACTTCCTGTTGCTCCAACAATTCCTCAAGCCGTACATGCAACTGTGCCTCAACCTGTTGTGCAGCCAACGAAATCCAGTGATGACAATTGGGCCTCTTTTGATGTTGCTTCTGAGGCAAAAACAACTCCTAGCCCCTCAAATTTAAATCCACTTGAATCTGTGCTGTCCCAATTGTCTGTGCCATCATCTTTACCTGCTCATGTTTCTGGAGTTCAAGGACCTATTGCAGCATCAACTCTTACTTCTGCTTCTGGAGCTGCAAGGGTTAGCGGTTTCTCAGCTTTCCCACCCAGTGGTACTTCAGTACAATCTCCTGGATTGACAACAGTATCGCCTCTTAATAATGCAGGACAGTGGTTCAGTCTACAGCATCAGCAACCGTTGTTCCCTGCTGCTGTTAGTCAGTCTACTGCTCAACAATTTACAGCACCAGTAGGTGGAGCTGTGAATAATCAGCCATGGAATATGCCCTCTGTACCCATGTTACATGGGCATCCAAACACACCAATGCCACATGCATATCCACATGCCTCAAAGCCTGCCAATGAGACTATTGCCGGTGTTGTCTCACAACCTTACACTGTAGAAGTAAAACCAAGTGAAAGAAAAGAACTTCCTGAGGATTTGTTCACTGTAAAATACTCATCCTTCCCTGCTCCAGTTCGAGGTTGGCAAATGGGTCTTCCCCATGGCATGGCTATCTCAATGCAATATAATAATGTGGTGCCAGTGCCAAGTTTTTCACAGCCATCAAAGTCAATGAATCCATTTGATGTCAGCGGTGGACCAACCCGGGATCAAGCCCCAACTGTATGTGACTTTTGA 1719 0.4508 MASRLKEDEKNERVIRGLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMSKFTSQEVSALQEGGNQRAKEIYFKEWDAQRQSFPDSSNVDRLRDFIKHVYVDRRFTGERTSDKPPRTKAGDKDDFYENRKSEAYQGGSKSPPYEDTYERRYSGSSPGGRSPGYDQESRQYGDYKRSPGRPPIINDWRREDRRVESQSPERAKDLGSSSPPVVRPVRDILGENVVPLRISEPPKPNSGRAADGSALTQRTASSSSLASSNGNPVDVKLETTKSLIDFDADPELPVAPTIPQAVHATVPQPVVQPTKSSDDNWASFDVASEAKTTPSPSNLNPLESVLSQLSVPSSLPAHVSGVQGPIAASTLTSASGAARVSGFSAFPPSGTSVQSPGLTTVSPLNNAGQWFSLQHQQPLFPAAVSQSTAQQFTAPVGGAVNNQPWNMPSVPMLHGHPNTPMPHAYPHASKPANETIAGVVSQPYTVEVKPSERKELPEDLFTVKYSSFPAPVRGWQMGLPHGMAISMQYNNVVPVPSFSQPSKSMNPFDVSGGPTRDQAPTVCDF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2665g00022 572 MobiDBLite consensus disorder prediction 257 280 - -
Gabi2665g00022 572 MobiDBLite consensus disorder prediction 123 280 - -
Gabi2665g00022 572 MobiDBLite consensus disorder prediction 123 147 - -
Gabi2665g00022 572 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Gabi2665g00022 572 PANTHER ARFGAP/RECO-RELATED 1 567 IPR044820 GO:0005096
Gabi2665g00022 572 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Gabi2665g00022 572 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Gabi2665g00022 572 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Gabi2665g00022 572 CDD ArfGap_AGFG 12 122 - -
Gabi2665g00022 572 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Gabi2665g00022 572 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Gabi2665g00022 572 MobiDBLite consensus disorder prediction 198 216 - -
Gabi2665g00022 572 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Gabi2665g00022 572 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Gabi2665g00022 572 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2665g00022 Gabi-Chr2665 247074 253302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2665g00022 12 122 C2H2 Transcription Factor Family AT4G21160 32.759 1.30e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2665g00022 - - gmx:102669541 905.975