Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2665g00011 ATGGGTTCCATGGGTAACCACGAGGTTGATGATAAGCATCATAGGGTTAACTTCTCAACCCAAAGAGGGTTTTTAACAAAACTCAAAACTGGGTTGAAAGAAACGTTCTTCCCTGATGATCCCTTCAGGCAATTTAAGAACGAGAAGAAGACATCACGAAGGTTCATCAAAGGGGTGCAATACTTCGTCCCAATCTTCGAGTGGCTACCAAATTACAATTTCCGCCTCTTTTTCTCTGACTTAATCGCTGGCATCACCATCACAAGCCTTGCCATCCCTCAAGGCATTAGCTATGCCAAACTTGCCAACATTCCTCCCCTCATTGGCCTTTATTCCAGCTTTGTCCCACCTCTTGTGTATGCTGTTTTTGGGAGCTCAAGGCACATGGCAGTGGGAACAATAGCGGCAGCATCATTGCTGATAGGACACACTATATCAACCGTGGCAGACCCAGAAGATGACCCAACGTTGTTTCTTCATTTGATTTTCACAACAACTTTTGTCACAGGTGTTTTCCAAGCTTGTTTGGGTATTTTCAGGTTGGGGATATTGGTGGATTTCTTTTCACATGCTACAATCACTGGCTTTATGGGAGGGACAGCAGTAATTCTCATACTCCAACAACTAAAGGGCATATTTGGCATGAAACATTTTTCAACCAAAACAAACGTTGTGGCAGTCATAAAGGCCATCTTCGACAATAAACATGAGATAAGGTGGGAAACCACAGTTCTTGGTGTGGTCTTCATTGTTTTCCTGCAAATTACCCGATACGTGAGGACTAGGAAACCAAAACTCTTTTGGGTATCAGCTATTGCTCCTATGACGACTGTAGTAGTTGCTGGCGTTTTCACGTACCTCGTCAAGGGCCAAAATCATGGAATTCAAATTGTGGGTCATCTAGATAAAGGATTAAATCCTTTGTCCATAAAGTATTTCAACTTTGAAAGTGAATATTTACCAGCAGTGTTGAAAGCTGGCATTATCACCGGCATCTTGTCATTGGCTGAAGGAATAGCAATTGGAAGAAGCTTTTCTGTTATTGATAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGTCTCATGAACTTATTTGGTTCTTTTACTTCATGTTACTTGACTAGTGGACCATTTTCCAAGACGGCTGTGAATTACAATGCAGGGTGTAAAACTGCCATGTCAAACGTAGTAATGGCAATTTTAATGGCGCTCACACTGCAGTTTTTGGCACCATTATTTGGCTACACCCCTCTTGTTGCTCTATCAGCTATTATTATATCTGCCATGATGGGGCTGATTAATTATGAAGAAGTTATTCATCTCTTTAAAGTTGATATGTTTGATTTTATTATTTGCATGGCTGCTTTCTTTGGAGTCACCTTTATAAGCATGGATGTTGGTCTCATGATGTCTGTTGGACTCAGTGTGGTTAGAGCACTCTTATATGTAGCTAGACCTGCCACATGCAAGATTGGAAAGTTATCTGATTTAGGTGTATATCGAGATGTTGAGCAATATACTGCTTCAACATTCCCTGGAGTTCTAATAATAGAACTTGGTTCTCCCGTTTACTTTGCAAATTCTGTGTACATTAAAGAAAGGATAATGAGGTATATTCGAAGTGAGCAAGGCTCTAGTGGAGATATTGTTGAGCACATCATACTCGATTTGTCAGGAGTGACATCCATTGATACAACAGCAATTGTGGGATTGTTGGAAACAAATAGAATGTTGGAAAAGAATGGAATTAAGATGTCATTGGTAAACCCAAGGCTGGAGGTTATGGAGAAGCTGATAGCAGCAAAGTTTGTTGACATCATTGGGAAGGAATCATTCTATCTAACATTGGATGATGCAGTGGTGTCAAGTCAATATTCACTTAGTACCTCGAAGACAAATAATGCTGAAGAGACAGTAGTTAAGGAAACTAGCCATGCCTAA 1950 0.4051 MGSMGNHEVDDKHHRVNFSTQRGFLTKLKTGLKETFFPDDPFRQFKNEKKTSRRFIKGVQYFVPIFEWLPNYNFRLFFSDLIAGITITSLAIPQGISYAKLANIPPLIGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGHTISTVADPEDDPTLFLHLIFTTTFVTGVFQACLGIFRLGILVDFFSHATITGFMGGTAVILILQQLKGIFGMKHFSTKTNVVAVIKAIFDNKHEIRWETTVLGVVFIVFLQITRYVRTRKPKLFWVSAIAPMTTVVVAGVFTYLVKGQNHGIQIVGHLDKGLNPLSIKYFNFESEYLPAVLKAGIITGILSLAEGIAIGRSFSVIDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMSNVVMAILMALTLQFLAPLFGYTPLVALSAIIISAMMGLINYEEVIHLFKVDMFDFIICMAAFFGVTFISMDVGLMMSVGLSVVRALLYVARPATCKIGKLSDLGVYRDVEQYTASTFPGVLIIELGSPVYFANSVYIKERIMRYIRSEQGSSGDIVEHIILDLSGVTSIDTTAIVGLLETNRMLEKNGIKMSLVNPRLEVMEKLIAAKFVDIIGKESFYLTLDDAVVSSQYSLSTSKTNNAEETVVKETSHA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2665g00011 649 Pfam Sulfate permease family 77 457 IPR011547 GO:0016020
Gabi2665g00011 649 NCBIfam sulfate permease 64 622 IPR001902 GO:0016020|GO:0055085
Gabi2665g00011 649 ProSiteProfiles STAS domain profile. 507 626 IPR002645 -
Gabi2665g00011 649 SUPERFAMILY SpoIIaa-like 508 623 IPR036513 -
Gabi2665g00011 649 Gene3D STAS domain 488 628 IPR036513 -
Gabi2665g00011 649 Pfam STAS domain 510 622 IPR002645 -
Gabi2665g00011 649 CDD STAS_SulP_like_sulfate_transporter 511 619 - -
Gabi2665g00011 649 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Gabi2665g00011 649 PANTHER SULFATE TRANSPORTER 27 630 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2665g00011 Gabi-Chr2665 143964 150726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2665g00011 12 634 Inorganic Solute Cotransporters AT5G19600 62.179 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2665g00011 K17471 - gmx:100789107 963.755