Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2665g00009 ATGGACGATATGGAAGATGATGCAAGGTACCCTCCAAAGTCCTTCTCTTTGCATCGCCAAAACCCATCCCATCGCCAGAAACACCCAATTCGAGGTGCCCCATATCATCAAAGACCAGTAGCCACTCGCTACGAGGAGGTGGACGACGAGGAAGACGAAGAAGCCGAGGAATACGACGATTACGACGACGAAAACGACGCCGGGGAGGACGAAGAAGTCGAAAACGCAAATGGGTATGGCGGGAATTTCGAAGAGGATGATGGGTTCGGGAGGAGCAACACGAGGAAGAGGAAGGTACGAGGTTCCTCCTCGGGAATCTCGAACTACGAGTTTGCACCTCGCGTGAAATTCTCGTACGGGAATAATCGTGGGGGCTCGGAGGAATGGACGGAGGAAGCGACTTTTGTGCTGTTGGAGGTGTGGGGTGACAAATTCCTTCAACTTGGGAGGAACAGTTTGAGGTCTGAGGAATGGAAAGATGTTGCTGAGAAGGTTTCTGAGGAATTGGAGGTTGAAAGGACAGTGGCACAATGTAGGAGCATGTTGGATAAGCTTAAAAGGAGGTACAAGAAAGAGAAGGCTAGAATGGATGAAATGGGTGTGAGTTCTTGTAAATGGGCTTATTTTAAGAAGATGGATATGTTGATGGCTTCATCTGCAAGGCAAGAGTATGGGCTTGCTTGTGGGGTTGATTCTGGTGAGTATGTGTTCATGAATACAAGGGTGTATTTGAATAGGTCCAATGAGTTTGATGAGATGAGGGATAGTCCTGTTGAGTCTGAGACCTCTGACGAGAATGATTCCGATGGGGTTGCGACCGCGCCGAGGAGGTCCGGTGGTGGCGGTGGTGGTGCTGATGATGATGAGGATGAAGAGGAGGAGACTTCCTTTAGGGTGCTGGCTGATTCTATTCAGAAGTTTGGGAAAATATATGAGAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAATAGGGAGTTGGAGCTGCAGAAGAAGCAGATTTTGGAAAGGGCTCAGGCTGAAATTACAAAAATACAGGAAGGAGATGAGGATGACCAGGACACTTCTGCAGAGAATCTCAGTGAATGA 1116 0.4812 MDDMEDDARYPPKSFSLHRQNPSHRQKHPIRGAPYHQRPVATRYEEVDDEEDEEAEEYDDYDDENDAGEDEEVENANGYGGNFEEDDGFGRSNTRKRKVRGSSSGISNYEFAPRVKFSYGNNRGGSEEWTEEATFVLLEVWGDKFLQLGRNSLRSEEWKDVAEKVSEELEVERTVAQCRSMLDKLKRRYKKEKARMDEMGVSSCKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNRSNEFDEMRDSPVESETSDENDSDGVATAPRRSGGGGGGADDDEDEEEETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEITKIQEGDEDDQDTSAENLSE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2665g00009 371 Coils Coil 175 202 - -
Gabi2665g00009 371 MobiDBLite consensus disorder prediction 351 371 - -
Gabi2665g00009 371 Gene3D - 129 191 - -
Gabi2665g00009 371 MobiDBLite consensus disorder prediction 46 73 - -
Gabi2665g00009 371 MobiDBLite consensus disorder prediction 1 103 - -
Gabi2665g00009 371 Pfam Myb/SANT-like DNA-binding domain 127 214 IPR044822 -
Gabi2665g00009 371 Coils Coil 311 342 - -
Gabi2665g00009 371 MobiDBLite consensus disorder prediction 252 296 - -
Gabi2665g00009 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 119 358 IPR044823 -
Gabi2665g00009 371 Coils Coil 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2665g00009 Gabi-Chr2665 102551 105852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2665g00009 297 356 Trihelix Transcription Factor Family AT3G14180 43.333 8.49e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi2665g00009 Myb_DNA-bind_4 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2665g00009 - - ccaj:109813475 474.167