Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2665g00005 ATGCCGACACGATCAACAGGAGCCATAACGCAAGACTGGGAGCCAGTGGTTCTGCACAAGTCGAAGCCCAAGGCTCAGGACCTGCGCAACCCCAAGGTTATGAACCAGGCTCTCCGGTCCGGTTCGGAGGTGCTGACGGTTAAGAAGTTTGACGCCGGTTCGAACAAGAAAACCGCCGGTCCGGCCGTGAACGCGAGGAAGCTCGACGAAGGGACCGAACCGGCTGCTCTGGAGCGCGTGGCGGGGGAGGTGAGGCACGCGATACAGAAGGCGCGTTTGGATAAGAAAATGAGCCAGGCTGAGCTGGCGAAACAGATAAACGAACGGACGCAGGTGGTTCAGGAGTACGAGAATGGAAAAGCCGTTCCTAACCAGGCCGTGCTTGCCAAGATGGAGAGGGTCCTTGGAGTGAAGCTCAGGGGCAAAGTCGGAAAATGA 438 0.5799 MPTRSTGAITQDWEPVVLHKSKPKAQDLRNPKVMNQALRSGSEVLTVKKFDAGSNKKTAGPAVNARKLDEGTEPAALERVAGEVRHAIQKARLDKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKVGK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2665g00005 145 ProSiteProfiles Cro/C1-type HTH domain profile. 88 142 IPR001387 -
Gabi2665g00005 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 142 - -
Gabi2665g00005 145 FunFam Multiprotein bridging factor 1 72 145 - -
Gabi2665g00005 145 Pfam Multiprotein bridging factor 1 11 80 IPR013729 -
Gabi2665g00005 145 SUPERFAMILY lambda repressor-like DNA-binding domains 85 139 IPR010982 GO:0003677
Gabi2665g00005 145 Coils Coil 88 108 - -
Gabi2665g00005 145 Gene3D - 71 145 IPR010982 GO:0003677
Gabi2665g00005 145 Pfam Helix-turn-helix 88 139 IPR001387 -
Gabi2665g00005 145 CDD HTH_XRE 87 139 IPR001387 -
Gabi2665g00005 145 SMART mbf_short4 87 142 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2665g00005 Gabi-Chr2665 80797 81495 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Gabi2665g00005 MBF1 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2665g00005 K03627 - qsa:O6P43_004045 243.817