Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2661g00006 ATGGCTGATTCAGGCTCAGGCTCTTCCAAGAGAATGTGGTGCTCCATCCCCGAAAAACTTCAGCTTCATGGAGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGGTTCCATGTGGTCTCAAGAGCTGCACTTAACATGGGTGTTAGCAAACTTGTTTTCCCAGTCTATCGGAACATCATTGCTTTGCTTTTGCTCCTTCCCTTTGCCTACTTCTTAGAAAAGAAGGAAAGGCCAGCGATTACTTTAAACTTCCTCTGCCAGTTCTTTTTTCTGGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTTGGAGAACACAACCCCAACCTTCGCATCAGCAATACAAAACTCTGTCCCAGCCATTACATTTCTCATGGCAGTCATACTCAGAATAGAGCAAGTGCAACTGAACCGAAAAGACGGGGTGGCTAAGGTGGCAGGAACCGTATTGTGTGTTACAGGAGCAACCGTGATTACACTTTACAAAGGCCCAACAATATACAGCCCAATACCTCCTCTAAATAGCAGCAACACAACACAAGTGTTTGATTTTGGATCACTCTCACTGGGAGATGCAAAGGGAAAAAACTGGACCCTTGGTTGTCTCTACCTCATTGGGCATTGCTTATCCTGGTCTGCTTGGCTCGTGTTTCAAGCACCAGTTCTCAAGAAGTACCCTGCTCGCCTCTCTGTTACTTCCTACACATGTTTCTTTGGACTCTTGCAATTTCTGGTTATTGCTTTGATCCTTGAAAGAGACTCACAGGCTTGGGTTTTCCACTCTGGTGGCGAAGCTTTCACAATTTTATACGCGGGAGTGGTAGCATCCGGAATTGCCTTCGCTGTTCAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAGCCTGTTCAGACATTTGTTGTTGCCATTATGGCTTCCATTGCTTTAGGAGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGGTGATTGTGGTGGGACTGTACTGTGTATTGTGGGGTAAAAATGAAGAGAAGAAGGTTGCAAAAGAACAACTTGTGCTTACATCTTCAGCAGAGCATAGCATCATAAGGCCCGCAAGCCACGCCAAAGCATCACTTAATCAACCACTCCTCTCTTCATCAACAGAGAATGTCTGA 1167 0.4644 MADSGSGSSKRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLCQFFFLALVGITANQGFYLLGLENTTPTFASAIQNSVPAITFLMAVILRIEQVQLNRKDGVAKVAGTVLCVTGATVITLYKGPTIYSPIPPLNSSNTTQVFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSAWLVFQAPVLKKYPARLSVTSYTCFFGLLQFLVIALILERDSQAWVFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVVIVVGLYCVLWGKNEEKKVAKEQLVLTSSAEHSIIRPASHAKASLNQPLLSSSTENV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2661g00006 388 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020
Gabi2661g00006 388 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020
Gabi2661g00006 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 346 - -
Gabi2661g00006 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Gabi2661g00006 388 PANTHER WAT1-RELATED PROTEIN 24 353 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2661g00006 Gabi-Chr2661 219211 222410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2661g00006 1 388 Nodulin-like Gene Family AT1G75500 75.064 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2661g00006 - - gmx:100792395 670.618