Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2660g00034 | ATGGCCACTCCTACGGCTTACCAAGAGCACTTACCTGCATCACCTTATTGGTTAAACAAAGGAGATAACGCATGGCAGATGACAGCAGCAACTCTGGTTGGTCTTCAGAGCATGCCAGGGCTTGTGATCCTTTATGCAAGCATAGTTAAGAAGAAATGGGCAGTGAATTCAGCTTTCATGGCTCTCTATGCCTTTGCAGCTGTTTTAATTTGTTGGGTGCTTTTGTGTTACCGAATGGCCTTTGGAGAGAAACTCCTTCCTTTTTGGGGTAAGGGTGCTCCTGCACTAGGCCAAAAGTTTCTCACAAAACGAGCCATGGTTCCTGAAAGTACCCAATATTACAACAATGGCACTGTTGAAACACCAACTGAAGAACCCTTTTTCCCTATGGCTTCCCTTGTTTATTTCCAATTCACTTTTGCTGCTATTACACTTATCTTATTGGCTGGCTCTGTCCTTGGAAGAATGAACATCAAAGCTTGGATGGCTTTTGTGCCACTTTGGCTAATTTTTTCTTACACTGTTGGTGCCTTCAGCCTCTGGGGTGGTGGCTTTCTCTATCATTGGGGTGTCATTGATTACTCTGGTGGCTATGTCATCCACCTCTCCTCTGGAATTGCTGGCCTCACTGCTGCTTATTGGGTTGGACCAAGGTTAAAGAGTGATAGGGAGAGGTTCCCACCAAACAATGTGCTGTTGATGCTTGCAGGTGCTGGTTTGCTTTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCAAACATTGCATCTTCTATTGCCATGTTAAACACTAACATTTGTGCAGCCACGAGTCTCCTTGTATGGACCTCTCTCGATGTCATCTTCTTTGGGAAACCATCTGTGATTGGAGCTGTTCAGGGCATGATGACTGGCCTTGTATGCATCACCCCAGGAGCAGGGCTAGTGCAATCGTGGGCGGCTATAGTGATGGGAATATTATCTGGGAGCATTCCGTGGGTGTCCATGATGATTCTTCATAAAAAGTCAAGTCTGCTCCAGAAGGTAGATGACACCCTTGGTGTATTTCATACACATGCTGTGGCTGGTCTTTTGGGTGGCCTCCTAACAGGTCTCTTTGCAGAACCAGCCCTTTGTAGACTACTATTGCCAGTGACAAATTCAAGGGGTGCATTCTATGGTGGAGGGGGTGGTATTCAGTTCTTGAAGCAATTGGTGGCAGCCATGTTTGTTATTGGATGGAACTTGGTCTCTACCACCATCATTCTCCTTTTCATACAATTGTTCATACCCTTGAGGATGCCGGACGAGCAGCTAGAGATCGGCGACGACGCCGTCCACGGCGAGGAAGCTTATGCTCTTTGGGGTGATGGTGAAAAATATGATCCAACCAGGCATGGTTCCTTACACACTGGCAACGCTACAGCATCACCTTATGTTAATGGTGCAAGAGGTGTAACAATAAATTTATAA | 1461 | 0.4648 | MATPTAYQEHLPASPYWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGEKLLPFWGKGAPALGQKFLTKRAMVPESTQYYNNGTVETPTEEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIASSIAMLNTNICAATSLLVWTSLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLLLPVTNSRGAFYGGGGGIQFLKQLVAAMFVIGWNLVSTTIILLFIQLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSLHTGNATASPYVNGARGVTINL | 486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2660g00034 | 486 | FunFam | Ammonium transporter | 6 | 451 | - | - | |
Gabi2660g00034 | 486 | NCBIfam | ammonium transporter | 22 | 448 | IPR001905 | GO:0008519|GO:0016020|GO:0072488 | |
Gabi2660g00034 | 486 | PANTHER | AMMONIUM TRANSPORTER MEP2 | 10 | 458 | IPR001905 | GO:0008519|GO:0016020|GO:0072488 | |
Gabi2660g00034 | 486 | SUPERFAMILY | Ammonium transporter | 17 | 430 | - | - | |
Gabi2660g00034 | 486 | Pfam | Ammonium Transporter Family | 24 | 448 | IPR024041 | GO:0008519|GO:0016020|GO:0072488 | |
Gabi2660g00034 | 486 | PRINTS | Rhesus blood group protein signature | 263 | 285 | IPR002229 | GO:0005886 | |
Gabi2660g00034 | 486 | PRINTS | Rhesus blood group protein signature | 137 | 153 | IPR002229 | GO:0005886 | |
Gabi2660g00034 | 486 | PRINTS | Rhesus blood group protein signature | 318 | 336 | IPR002229 | GO:0005886 | |
Gabi2660g00034 | 486 | PRINTS | Rhesus blood group protein signature | 232 | 250 | IPR002229 | GO:0005886 | |
Gabi2660g00034 | 486 | ProSitePatterns | Ammonium transporters signature. | 193 | 218 | IPR018047 | GO:0008519|GO:0016020|GO:0072488 | |
Gabi2660g00034 | 486 | Gene3D | Ammonium transporter AmtB like domains | 3 | 451 | IPR029020 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2660g00034 | Gabi-Chr2660 | 350890 | 354473 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2660g00034 | 130 | 486 | Inorganic Solute Cotransporters | AT2G38290 | 77.994 | 0.0 | 550 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2660g00034 | K03320 | - | gmx:100790119 | 882.093 |