Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2660g00034 ATGGCCACTCCTACGGCTTACCAAGAGCACTTACCTGCATCACCTTATTGGTTAAACAAAGGAGATAACGCATGGCAGATGACAGCAGCAACTCTGGTTGGTCTTCAGAGCATGCCAGGGCTTGTGATCCTTTATGCAAGCATAGTTAAGAAGAAATGGGCAGTGAATTCAGCTTTCATGGCTCTCTATGCCTTTGCAGCTGTTTTAATTTGTTGGGTGCTTTTGTGTTACCGAATGGCCTTTGGAGAGAAACTCCTTCCTTTTTGGGGTAAGGGTGCTCCTGCACTAGGCCAAAAGTTTCTCACAAAACGAGCCATGGTTCCTGAAAGTACCCAATATTACAACAATGGCACTGTTGAAACACCAACTGAAGAACCCTTTTTCCCTATGGCTTCCCTTGTTTATTTCCAATTCACTTTTGCTGCTATTACACTTATCTTATTGGCTGGCTCTGTCCTTGGAAGAATGAACATCAAAGCTTGGATGGCTTTTGTGCCACTTTGGCTAATTTTTTCTTACACTGTTGGTGCCTTCAGCCTCTGGGGTGGTGGCTTTCTCTATCATTGGGGTGTCATTGATTACTCTGGTGGCTATGTCATCCACCTCTCCTCTGGAATTGCTGGCCTCACTGCTGCTTATTGGGTTGGACCAAGGTTAAAGAGTGATAGGGAGAGGTTCCCACCAAACAATGTGCTGTTGATGCTTGCAGGTGCTGGTTTGCTTTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCAAACATTGCATCTTCTATTGCCATGTTAAACACTAACATTTGTGCAGCCACGAGTCTCCTTGTATGGACCTCTCTCGATGTCATCTTCTTTGGGAAACCATCTGTGATTGGAGCTGTTCAGGGCATGATGACTGGCCTTGTATGCATCACCCCAGGAGCAGGGCTAGTGCAATCGTGGGCGGCTATAGTGATGGGAATATTATCTGGGAGCATTCCGTGGGTGTCCATGATGATTCTTCATAAAAAGTCAAGTCTGCTCCAGAAGGTAGATGACACCCTTGGTGTATTTCATACACATGCTGTGGCTGGTCTTTTGGGTGGCCTCCTAACAGGTCTCTTTGCAGAACCAGCCCTTTGTAGACTACTATTGCCAGTGACAAATTCAAGGGGTGCATTCTATGGTGGAGGGGGTGGTATTCAGTTCTTGAAGCAATTGGTGGCAGCCATGTTTGTTATTGGATGGAACTTGGTCTCTACCACCATCATTCTCCTTTTCATACAATTGTTCATACCCTTGAGGATGCCGGACGAGCAGCTAGAGATCGGCGACGACGCCGTCCACGGCGAGGAAGCTTATGCTCTTTGGGGTGATGGTGAAAAATATGATCCAACCAGGCATGGTTCCTTACACACTGGCAACGCTACAGCATCACCTTATGTTAATGGTGCAAGAGGTGTAACAATAAATTTATAA 1461 0.4648 MATPTAYQEHLPASPYWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGEKLLPFWGKGAPALGQKFLTKRAMVPESTQYYNNGTVETPTEEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIASSIAMLNTNICAATSLLVWTSLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLLLPVTNSRGAFYGGGGGIQFLKQLVAAMFVIGWNLVSTTIILLFIQLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSLHTGNATASPYVNGARGVTINL 486
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2660g00034 486 FunFam Ammonium transporter 6 451 - -
Gabi2660g00034 486 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gabi2660g00034 486 PANTHER AMMONIUM TRANSPORTER MEP2 10 458 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gabi2660g00034 486 SUPERFAMILY Ammonium transporter 17 430 - -
Gabi2660g00034 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gabi2660g00034 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Gabi2660g00034 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Gabi2660g00034 486 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Gabi2660g00034 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Gabi2660g00034 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gabi2660g00034 486 Gene3D Ammonium transporter AmtB like domains 3 451 IPR029020 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2660g00034 Gabi-Chr2660 350890 354473 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2660g00034 130 486 Inorganic Solute Cotransporters AT2G38290 77.994 0.0 550
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2660g00034 K03320 - gmx:100790119 882.093