Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2660g00019 ATGTCAGAACTCATGAAAAATCCAAAGGCTATGGAAAAAGCACAAACTGAGGTAAGAAAGGTTTTTGGACTTAAAGGATATGTAGATGAAACAAACCTTAACCATCTGAAGTACTTAAATTCAGTCATCAAAGAAACCTTGAGGCTACATCCCCCTGAAGTATTATCAATTCCAAGAGAAAACAGTGAGGAATGTGTTATCAAAGGATATGAGATACCTGCTAAGAGCACTATCATAGTCAATGCTTGGGCTATTGGAAGAGATCCTAAATATTGGGCTGAAGCTGAGAGATTTTTACCAGAGAGATTTCTTGATAACCCAATTGATTTTAATGGCACCAATTTCCAATATATCCCGTTTGGTGCTGGAAGGAGAATATGCCCAGGAATTGCATTTTCTATACCTTACTTACAGCTTCCACTTGCCAATTTGCTTTATCATTTTGATTGGAAGTTACCAAATGGAATGAACAATGAAGAATTGGACATGACTGAGAGCTTTGGCATTGTAGCACCAAAGAAGAATGATCTATGCTTAATCCCCATTGCATATAAACCTTCTGGAAAAGCAATCATTTGA 579 0.3696 MSELMKNPKAMEKAQTEVRKVFGLKGYVDETNLNHLKYLNSVIKETLRLHPPEVLSIPRENSEECVIKGYEIPAKSTIIVNAWAIGRDPKYWAEAERFLPERFLDNPIDFNGTNFQYIPFGAGRRICPGIAFSIPYLQLPLANLLYHFDWKLPNGMNNEELDMTESFGIVAPKKNDLCLIPIAYKPSGKAII 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2660g00019 192 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Gabi2660g00019 192 Gene3D Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 Pfam Cytochrome P450 3 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2660g00019 192 PANTHER OS08G0105600 PROTEIN 1 186 - -
Gabi2660g00019 192 FunFam Predicted protein 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2660g00019 Gabi-Chr2660 156061 156639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2660g00019 1 184 Cytochrome P450 AT3G26330 51.630 6.27e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2660g00019 - - gmx:100779120 302.753