Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2660g00002 ATGGGGGAAGGTGAAGGTGGCGCTTCCAAGAATGTGTCGTCCTCGTCATCAGAAGGAGTTGTTCCGGCGGCGGCGTTGGATGTTCCGGCGAAGAAGCTGGCGAGGCAGCTTGATTTCTCCGGCGTGCCGGAACACTCTCAATTGCAATCGCATTCGCAGCCTCCGCCGCCGCCTCAGACCGAAATGCAGCAACCGGTGATTGTGACGCCGTTGCCGCCGCAGACACCTCATCCTTCGGTTAAGATTGGGAAACCAGAATCTCCACAATCAAGATCAAGACCTAACTTTGAAATGAAAGATGCTACTCCAAAGAAACAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGCTTCAACAATGTCGAAAATGAAGCTGCTAGACGGGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCGAGCAGCCCGCATGGAACACGTGATAGCAGGGAGGATGCCGGGGAAGTTTTAATATTAGGAAAACATAACAAGGGGTGCCATTGTAAAAAGTCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAATATTCTTTGTTCTGAAAATTGTAAGTGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAGAACAAAATAACAACATGACATACATTCAGCAAGCGGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTACTCATCGCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAACTATTCTTTTGGCCTACAGCCAAGGATCCATCCATTAGCAAGTTGGGACAACAGGTAAACCATGTCCGAGGTCCAGCACCCTCCTCATCCCTGTCATCTGTCCCAGGTGCTCGTGTTGGAACTGCAACATTAGGTCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATTATACAACCGCAGCACCTGAAGGAGCTTTGTTCAGTTCTGGTGCTAGTATCTGGACAAGCTGCAAAGACACTTACAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAAGAGCAATTACCAAGTCAAAAGGAAGGTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCCCAGACAATTCCAGCTCAGATGTCGCTGATGTCCCTAAAAGGAGGCCAATGTCTCCTGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACAATGTTCATGACAGCTGCCTCCCCCATTGGGCCAATGGCCCATGCTACGTCTTCACAATTTCCTTATGGACAAGGAATGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTACTAACAAAATTTAGAGATTTTCTCAATAGGGTTATTACTATGGGAGAAATAAACGAAACAAAATGTTCTTCATTGGCCAGAAGTGAATTAGAGAGTCAAAAAGACCCTATCATCAGTGGCATTGGAAACACCAATACTGAGATAGTGCATCAGCAGGTAGCCACTAGCAATGGTGTTACCAAAGCTGTTGTTCCACCGGGGGCCACAACTTCAGCATCTATGATCCCGGGTAATGTTCTTACTGAAAATGGGGAAACTGAGCTGAAGATGGAAAAAGATATGAAAGGAATCTAA 1737 0.4491 MGEGEGGASKNVSSSSSEGVVPAAALDVPAKKLARQLDFSGVPEHSQLQSHSQPPPPPQTEMQQPVIVTPLPPQTPHPSVKIGKPESPQSRSRPNFEMKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGEQNNNMTYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFWPTAKDPSISKLGQQVNHVRGPAPSSSLSSVPGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKNLMEKHTEDQTETSLASSTQEQLPSQKEGDVEKAMADDCSSANQTDKISPDNSSSDVADVPKRRPMSPGTLALMCDEQDTMFMTAASPIGPMAHATSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPIISGIGNTNTEIVHQQVATSNGVTKAVVPPGATTSASMIPGNVLTENGETELKMEKDMKGI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2660g00002 578 MobiDBLite consensus disorder prediction 402 420 - -
Gabi2660g00002 578 MobiDBLite consensus disorder prediction 50 79 - -
Gabi2660g00002 578 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2660g00002 578 MobiDBLite consensus disorder prediction 35 102 - -
Gabi2660g00002 578 SMART CXC_2 104 144 IPR033467 -
Gabi2660g00002 578 SMART CXC_2 189 230 IPR033467 -
Gabi2660g00002 578 ProSiteProfiles CRC domain profile. 105 229 IPR005172 -
Gabi2660g00002 578 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 106 141 IPR005172 -
Gabi2660g00002 578 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 192 226 IPR005172 -
Gabi2660g00002 578 PANTHER TESMIN/TSO1-RELATED 45 498 IPR028307 -
Gabi2660g00002 578 MobiDBLite consensus disorder prediction 363 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2660g00002 Gabi-Chr2660 17341 36587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2660g00002 28 542 CPP Transcription Factor Family AT4G29000 56.600 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gabi2660g00002 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2660g00002 - - gmx:100818116 909.442